RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RYKP34925 604 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 NKX6-1P78426 367 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 PDCD4Q53EL6 469 aaKnown RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 MAVSQ7Z434 540 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 GABRG1Q8N1C3 465 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 GLB1L3Q8NCI6 653 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 TRNT1Q96Q11 434 aaKnown RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 CCL19Q99731 98 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 TACO1Q9BSH4 297 aaKnown RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 SLC38A1Q9H2H9 487 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 BCO1Q9HAY6 547 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 CHRM4P08173 479 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 DIO1P49895 249 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 ANXA11P50995 505 aaKnown RBP20.44■□□□□ 0.86
COL9A3-213ENST00000489045 KCNJ10P78508 379 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 TXNL4AP83876 142 aaKnown RBP20.44■□□□□ 0.86
COL9A3-213ENST00000489045 RASGEF1BQ0VAM2 473 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 TSC22D1Q15714 1073 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 SYT14P1Q58G82 188 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 COX20Q5RI15 118 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 DNAJC14Q6Y2X3 702 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-213ENST00000489045 ARFGAP2Q8N6H7 521 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 STEAP2Q8NFT2 490 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 SLC25A43Q8WUT9 341 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-213ENST00000489045 PIGTQ969N2 578 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 S100PBPQ96BU1 408 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 PIP5K1AQ99755 562 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 CCDC106Q9BWC9 280 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 EXOSC3Q9NQT5 275 aaKnown RBP20.44■□□□□ 0.86
COL9A3-213ENST00000489045 CTPS2Q9NRF8 586 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 LIPT1Q9Y234 373 aa20.44■□□□□ 0.86
COL9A3-213ENST00000489045 RFXANKO14593 260 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 CYTIPO60759 359 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 SMPD2O60906 423 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 SLC22A3O75751 556 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 FESP07332 822 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 APOBEC1P41238 236 aaKnown RBP20.43■□□□□ 0.86
COL9A3-213ENST00000489045 C20orf204Q6ZNR8 217 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 LRRC74BQ6ZQY2 392 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 TMPPEQ6ZT21 453 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 CNOT9Q92600 299 aaKnown RBP20.43■□□□□ 0.86
COL9A3-213ENST00000489045 PLPPR2Q96GM1 343 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF300Q96RE9 604 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-213ENST00000489045 SLC6A13Q9NSD5 602 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 CHRNA9Q9UGM1 479 aa20.43■□□□□ 0.86
COL9A3-213ENST00000489045 SPIN1Q9Y657 262 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-213ENST00000489045 AGAP5A6NIR3 686 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 SULT2B1O00204 365 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 ADAM11O75078 769 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 ADAP00813 363 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 IL6P05231 212 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 TFPIP10646 304 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 IL32P24001 234 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 NR1H2P55055 460 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 CSNK2A1P68400 391 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-213ENST00000489045 SFRP5Q5T4F7 317 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 ALKBH2Q6NS38 261 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 GRINAQ7Z429 371 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 PIWIL2Q8TC59 973 aaKnown RBP20.42■□□□□ 0.86
COL9A3-213ENST00000489045 WDR60Q8WVS4 1066 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF775Q96BV0 537 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-213ENST00000489045 DNAJA3Q96EY1 480 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 OR52B2Q96RD2 323 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 HDHD5Q9BXW7 423 aa20.42■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF814B7Z6K7 855 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 AP3D1O14617 1153 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 KLF11O14901 512 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 KRT75O95678 551 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 PLAUP00749 431 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 NR2F1P10589 423 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 FOSL1P15407 271 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 OR3A2P47893 321 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 IDH2P48735 452 aaKnown RBP20.41■□□□□ 0.86
COL9A3-213ENST00000489045 GSTA3Q16772 222 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 SHEQ5VZ18 495 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF704Q6ZNC4 412 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-213ENST00000489045 CMIPQ8IY22 773 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 LRRC75A-AS1Q8N1F1 130 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF75CPQ92670 426 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-213ENST00000489045 GSX1Q9H4S2 264 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-213ENST00000489045 ZIM2Q9NZV7 527 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 PRSS50Q9UI38 385 aa20.41■□□□□ 0.86
COL9A3-213ENST00000489045 NIPBLQ6KC79 2804 aaeCLIP20.4■□□□□ 0.86
COL9A3-213ENST00000489045 ZNF724A8MTY0 619 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 ARHGEF9O43307 516 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 RPS4Y1P22090 263 aaKnown RBP20.4■□□□□ 0.86
COL9A3-213ENST00000489045 EDNRAP25101 427 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 P2RY6Q15077 328 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 Q5PR19 223 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 ABLIM2Q6H8Q1 611 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 Q6ZT83 130 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.4■□□□□ 0.86
COL9A3-213ENST00000489045 P3H2Q8IVL5 708 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 OR9I1Q8NGQ6 314 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 KISS1RQ969F8 398 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-213ENST00000489045 ARL5BQ96KC2 179 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 OR11A1Q9GZK7 315 aa20.4■□□□□ 0.86
COL9A3-213ENST00000489045 MTHFD2LQ9H903 347 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-213ENST00000489045 SDR39U1Q9NRG7 319 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms