RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SIAH2O43255 324 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 DIAPH2O60879 1101 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 GSNP06396 782 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 YES1P07947 543 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 ZCCHC18P0CG32 403 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 NR2F1P10589 423 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 CD99P14209 185 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 FPR1P21462 350 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 HTR3AP46098 478 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 NR1H2P55055 460 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 STX1BP61266 288 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 SYPL1Q16563 259 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 BEX5Q5H9J7 111 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 ANKRD34AQ69YU3 496 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 TFAP2EQ6VUC0 442 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 DNAJC14Q6Y2X3 702 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 TUSC5Q8IXB3 177 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 MIER2Q8N344 545 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 STEAP2Q8NFT2 490 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 PNPT1Q8TCS8 783 aaKnown RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 ZHX1-C8orf76Q96EF9 292 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 ITCHQ96J02 903 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 MARK4Q96L34 752 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 C7orf26Q96N11 449 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 ACTR6Q9GZN1 396 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 QRSL1Q9H0R6 528 aaKnown RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 MTHFD2LQ9H903 347 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 THUMPD1Q9NXG2 353 aaKnown RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 USH1CQ9Y6N9 552 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 VPS13CQ709C8 3753 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 A0A1W2PPR1 153 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 TMEM247A6NEH6 219 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 AGAP5A6NIR3 686 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 SULT2B1O00204 365 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 DNPH1O43598 174 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CYTIPO60759 359 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 TGDSO95455 350 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 DBIP07108 87 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CHRM4P08173 479 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 IL7RP16871 459 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CD53P19397 219 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 RPS4Y1P22090 263 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 RYKP34925 604 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CLK1P49759 484 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 DIO1P49895 249 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 POLR2JP52435 117 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 RASGEF1BQ0VAM2 473 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 TMPPEQ6ZT21 453 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 MAVSQ7Z434 540 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 PEX5LQ8IYB4 626 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 PIGTQ969N2 578 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF524Q96C55 264 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 OR52B2Q96RD2 323 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 USB1Q9BQ65 265 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 PSD2Q9BQI7 771 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 PRDM4Q9UKN5 801 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
SPTLC1-207ENST00000488921 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 FAM234BA2RU67 622 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF724A8MTY0 619 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 FAAHO00519 579 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 PMS2P2O95744 297 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 FESP07332 822 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 TFPIP10646 304 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 KLK2P20151 261 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 IL32P24001 234 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 CRISP3P54108 245 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 DSTNP60981 165 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 P2RY6Q15077 328 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 COX20Q5RI15 118 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 EPGNQ6UW88 154 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF440Q8IYI8 595 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 GABRG1Q8N1C3 465 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 ZG16BQ96DA0 208 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 MAGEB18Q96M61 343 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 PIP5K1AQ99755 562 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 RAD21L1Q9H4I0 556 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 TPT1P8Q9HAU6 139 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 NGBQ9NPG2 151 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 TCF7L2Q9NQB0 619 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 CTPS2Q9NRF8 586 aa12.28□□□□□ -0.44
SPTLC1-207ENST00000488921 DSCAMO60469 2012 aa12.27□□□□□ -0.44
SPTLC1-207ENST00000488921 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CLDN24A6NM45 220 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms