RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PLSCR4Q9NRQ2 329 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 HEATR5AQ86XA9 2040 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 TUBAL3A6NHL2 446 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CTAG2O75638 210 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 PGM3O95394 542 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 THBS1P07996 1170 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ARAFP10398 606 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 KLK2P20151 261 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ENPP1P22413 925 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CPA2P48052 419 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 EPS8Q12929 822 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 GNA13Q14344 377 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 DAZAP2Q15038 168 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ADRM1Q16186 407 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 HSP90B2PQ58FF3 399 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 RUNDC3AQ59EK9 446 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 PPP4R4Q6NUP7 873 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF836Q6ZNA1 936 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 TMPPEQ6ZT21 453 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 GRINAQ7Z429 371 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 LSRQ86X29 649 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF563Q8TA94 476 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ABHD3Q8WU67 409 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CPPED1Q9BRF8 314 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 TIGARQ9NQ88 270 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 SERINC1Q9NRX5 453 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 GLRX2Q9NS18 164 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 LEF1Q9UJU2 399 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ING1Q9UK53 422 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF443Q9Y2A4 671 aaPredicted RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 NDUFAF1Q9Y375 327 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 ANKHD1Q8IWZ3 2542 aaKnown RBP14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CREBBPQ92793 2442 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CSMD2Q7Z408 3487 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 LRBAP50851 2863 aa14.24□□□□□ -0.13
CTDSP1-209ENST00000488627 CFAP73A6NFT4 308 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 TROVE2P10155 538 aaKnown RBP eCLIP14.23□□□□□ -0.132e-13■□□□□ 10.5
CTDSP1-209ENST00000488627 EPXP11678 715 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 PPIBP23284 216 aaKnown RBP14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 SLC7A1P30825 629 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 LIN52Q52LA3 116 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 SYT14P1Q58G82 188 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 GCNT6Q5T4J0 391 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 RNF220Q5VTB9 566 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 OR6K3Q8NGY3 331 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 ARL5BQ96KC2 179 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF317Q96PQ6 595 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 OR5B2Q96R09 309 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 SPATA9Q9BWV2 254 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 ADAM19Q9H013 955 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 CHRNA9Q9UGM1 479 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 OSGIN1Q9UJX0 560 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 PRDM4Q9UKN5 801 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 PROCRQ9UNN8 238 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 PDZD2O15018 2839 aa14.23□□□□□ -0.13
CTDSP1-209ENST00000488627 TMEM247A6NEH6 219 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 FBP2O00757 339 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 PLGP00747 810 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 PABPC4LP0CB38 370 aaKnown RBP14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 GKN3PP0CG01 181 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 PRG2P13727 222 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ETS2P15036 469 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 TACR3P29371 465 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 AGTR1P30556 359 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 CD79BP40259 229 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 SLC1A3P43003 542 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ARFIP2P53365 341 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 SF3A3Q12874 501 aaKnown RBP eCLIP14.22□□□□□ -0.137e-7■■■□□ 16.8
CTDSP1-209ENST00000488627 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 GTF2IRD2BQ6EKJ0 949 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 FCRLAQ7L513 359 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 GTF2IRD2Q86UP8 949 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF440Q8IYI8 595 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 SLC25A43Q8WUT9 341 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ANKRD27Q96NW4 1050 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 CGREF1Q99674 301 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 TMEM38AQ9H6F2 299 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 GP6Q9HCN6 339 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 SAR1AQ9NR31 198 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 RASSF1Q9NS23 344 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ELOVL5Q9NYP7 299 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF232Q9UNY5 417 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 IFT52Q9Y366 437 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 EMC9Q9Y3B6 208 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 POLQO75417 2590 aa14.22□□□□□ -0.13
CTDSP1-209ENST00000488627 TMED7-TICAM2A0A0A6YYA0 188 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 IGHV3-15A0A0B4J1V0 119 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 A6NNC1 897 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 SMAD9O15198 467 aaKnown RBP14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 PRKD3O94806 890 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 FKBP2P26885 142 aaKnown RBP14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 CCKARP32238 428 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 UGT2B10P36537 528 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 CPOXP36551 454 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 HTR3AP46098 478 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 CLK1P49759 484 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms