RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 UBQLNLQ8IYU4 475 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 CENPSQ8N2Z9 138 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 RELL2Q8NC24 303 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 OR2L5Q8NG80 312 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 APOOQ9BUR5 198 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 PDFQ9HBH1 243 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 BCAP29Q9UHQ4 241 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 TRMT6Q9UJA5 497 aaKnown RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF490Q9ULM2 529 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 FKBP7Q9Y680 259 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 CROCCQ5TZA2 2017 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 TMEM131Q92545 1883 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 PKDREJQ9NTG1 2253 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 BAZ2AQ9UIF9 1905 aaKnown RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 DCHS2Q6V1P9 2916 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 MACROD2A1Z1Q3 448 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 FRG2CA6NGY1 282 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 DDX39AO00148 427 aaKnown RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 HAS3O00219 553 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 RANBP6O60518 1105 aaKnown RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 LYPD3O95274 346 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 BAG2O95816 211 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 OAS1P00973 400 aaKnown RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF286BP0CG31 522 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 PTPN4P29074 926 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 PITPNBP48739 271 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 DHPSP49366 369 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 EMDP50402 254 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 HERVK_113P63132 956 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ERVK-8P63133 956 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF85Q03923 595 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 GFPT1Q06210 699 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF79Q15937 498 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 CAMK4Q16566 473 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 PARP6Q2NL67 630 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 CMPK2Q5EBM0 449 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 SEL1L2Q5TEA6 688 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 TFAP2EQ6VUC0 442 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 GOLGA7Q7Z5G4 137 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 MCOLN2Q8IZK6 566 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 BATF2Q8N1L9 274 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 GPR137CQ8N3F9 429 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 OR13F1Q8NGS4 319 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 RNASE8Q8TDE3 154 aaKnown RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 TMEM45BQ96B21 275 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 VPS39Q96JC1 886 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF560Q96MR9 790 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 JPH2Q9BR39 696 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 CBWD1Q9BRT8 395 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 HCAR1Q9BXC0 346 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 ERVK-6Q9BXR3 956 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 CWH43Q9H720 699 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 KCNMB3Q9NPA1 279 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 CLIP2Q9UDT6 1046 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 Q9UF83 564 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 APOBEC3BQ9UH17 382 aaKnown RBP3.12□□□□□ -1.91
ITGB1-214ENST00000488427 FAM153AQ9UHL3 310 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 MYH6P13533 1939 aa3.12□□□□□ -1.91
ITGB1-214ENST00000488427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF638Q14966 1978 aaKnown RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SLC17A2O00624 439 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 TSC22D2O75157 780 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SERF1AO75920 110 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 ABHD2P08910 425 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SLC35G4P0C7Q5 338 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SLC35E2P0CK97 266 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SFTPCP11686 197 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 GNSP15586 552 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 MGMTP16455 207 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SDC1P18827 310 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 STK19P49842 368 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 NT5C2P49902 561 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 CCL11P51671 97 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 HNRNPFP52597 415 aaKnown RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 UBXN1Q04323 297 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 IL23RQ5VWK5 629 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 PRAMEF7Q5VXH5 474 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SPNS3Q6ZMD2 512 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 BNIPLQ7Z465 357 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 P4HA3Q7Z4N8 544 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 YRDCQ86U90 279 aaKnown RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 LRRC17Q8N6Y2 441 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 CCDC26Q8TAB7 109 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SETD7Q8WTS6 366 aaKnown RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 DLX4Q92988 240 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SNX21Q969T3 373 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 RAB3CQ96E17 227 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 CARD6Q9BX69 1037 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 POLD4Q9HCU8 107 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 AATFQ9NY61 560 aaKnown RBP eCLIP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 MIOXQ9UGB7 285 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 SMC3Q9UQE7 1217 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 PDE10AQ9Y233 779 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 PLEKHA6Q9Y2H5 1048 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 MAP1AP78559 2803 aaPredicted RBP3.11□□□□□ -1.91
ITGB1-214ENST00000488427 MXRA5Q9NR99 2828 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 UBE4BO95155 1302 aa3.11□□□□□ -1.91
ITGB1-214ENST00000488427 ARHGAP42A6NI28 874 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 CCDC69A6NI79 296 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms