RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CUL1Q13616 776 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 MXD4Q14582 209 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 SYPL1Q16563 259 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 DNAJC21Q5F1R6 531 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 C9orf129Q5T035 196 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 SPATA46Q5T0L3 261 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 ATF7IP2Q5U623 682 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 FAM199XQ6PEV8 388 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLC35F2Q8IXU6 374 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 CNPY4Q8N129 248 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 LINC01561Q8N1V8 128 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 LRRC43Q8N309 656 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 TMEM252Q8N6L7 170 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 KIR3DL3Q8N743 410 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 GMCL1P1Q8NEA9 526 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 ARNTL2Q8WYA1 636 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 TXN2Q99757 166 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 CHIAQ9BZP6 476 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 POLR2J2Q9GZM3 115 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 RAB33BQ9H082 229 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 POLR2J3Q9H1A7 115 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 APMAPQ9HDC9 416 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 SH2D2AQ9NP31 389 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 CGNQ9P2M7 1197 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 PCSK1NQ9UHG2 260 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 BLOC1S6Q9UL45 172 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 TMCO1Q9UM00 188 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 RASD1Q9Y272 281 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 USP16Q9Y5T5 823 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 TTC21BQ7Z4L5 1316 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 ATP10DQ9P241 1426 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 KIF2AO00139 706 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CDX4O14627 284 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 ABCD4O14678 606 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF264O43296 627 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 EMC8O43402 210 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 EFNA2O43921 213 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR10H3O60404 316 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CA1P00915 261 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 LGALS2P05162 132 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CYP2B6P20813 491 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 LEPP41159 167 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 BTDP43251 543 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 DAP3P51398 398 aaKnown RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 PKNOX1P55347 436 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 HSD17B7P56937 341 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 SAMD4BQ5PRF9 694 aaKnown RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 FAM43BQ6ZT52 329 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 GRAMD2AQ8IUY3 354 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CCDC65Q8IXS2 484 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 ANKFN1Q8N957 763 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR1E3Q8WZA6 343 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 FAM3CQ92520 227 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 OSTF1Q92882 214 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 TRIM44Q96DX7 344 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CYYR1Q96J86 154 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 RPRD1AQ96P16 312 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 TSGA13Q96PP4 275 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 HIST1H4GQ99525 98 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 GAL3ST1Q99999 423 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLC39A3Q9BRY0 314 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 EDEM2Q9BV94 578 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 RAB34Q9BZG1 259 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLC17A5Q9NRA2 495 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 TREM2Q9NZC2 230 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 NAP1L2Q9ULW6 460 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 CLSPNQ9HAW4 1339 aa2.68□□□□□ -1.98
HMGB1P36-201ENST00000487709 PRRC2AP48634 2157 aaKnown RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 TRDCB7Z8K6 153 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 GPR89AB7ZAQ6 455 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 GOLGA8SH3BPF8 625 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 BTN3A3O00478 584 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 TAPBPO15533 448 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 RS1O15537 224 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 MED7O43513 233 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 CXCL13O43927 109 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 NEBLO76041 1014 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 GPR89BP0CG08 455 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 PNMTP11086 282 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 CPN1P15169 458 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF44P15621 663 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 CD1EP15812 388 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 HTR1FP30939 366 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 RPL13AP40429 203 aaKnown RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 SPIBQ01892 262 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 CNTN2Q02246 1040 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 DPYSL2Q16555 572 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 EXOC3L2Q2M3D2 409 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 TIGITQ495A1 244 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 C10orf120Q5SQS8 335 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 Q6ZPB1 254 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 C17orf82Q86X59 251 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 ERI1Q8IV48 349 aaKnown RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 SVOPLQ8N434 492 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 ARL6IP6Q8N6S5 226 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 CCDC71LQ8N9Z2 235 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR5L2Q8NGL0 311 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 UCN3Q969E3 161 aa2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 EFHD2Q96C19 240 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P36-201ENST00000487709 TGM7Q96PF1 710 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms