RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SPDYE7PQ495Y7 208 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 KANK2Q63ZY3 851 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF544Q6NX49 715 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCDC63Q8NA47 563 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 ST8SIA1Q92185 356 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 APH1AQ96BI3 265 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR7D2Q96RA2 312 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 INPP5KQ9BT40 448 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 THUMPD3Q9BV44 507 aaKnown RBP17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 NOSIPQ9Y314 301 aaKnown RBP17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 YLPM1P49750 1951 aaKnown RBP17.08■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF716A6NP11 495 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 HAX1O00165 279 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SULT2B1O00204 365 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 CYP7B1O75881 506 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 LY6HO94772 140 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 C6orf47O95873 294 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 CHEK2O96017 543 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 CSF3P09919 207 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SRD5A1P18405 259 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 EFNA4P52798 201 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 FOXG1P55316 489 aaPredicted RBP17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SESN3P58005 492 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 CSNK2A1P68400 391 aaPredicted RBP17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 LSM11P83369 360 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 MERTKQ12866 999 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SYT14P1Q58G82 188 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 IL17RELQ6ZVW7 336 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 MTDHQ86UE4 582 aaKnown RBP17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 DEPDC4Q8N2C3 294 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 OR5D16Q8NGK9 328 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SDF2Q99470 211 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 TXLNGYQ9BZA5 131 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 LAT2Q9GZY6 243 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 SERINC1Q9NRX5 453 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 ASB6Q9NWX5 421 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 TAS2R16Q9NYV7 291 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 GIMAP2Q9UG22 337 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 KCNE5Q9UJ90 142 aa17.08■□□□□ 0.32
SMPDL3A-202ENST00000487215 CENPVL1A0A0U1RR11 272 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 NTF4P34130 210 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 CRHR1P34998 444 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 RPL3P39023 403 aaKnown RBP17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 GZMKP49863 264 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 GABRA6Q16445 453 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 DDIASQ8IXT1 998 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 OR5AK3PQ8NH89 298 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 SFXN5Q8TD22 340 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 SLC25A43Q8WUT9 341 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 MUS81Q96NY9 551 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 GATA5Q9BWX5 397 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 C1QTNF6Q9BXI9 259 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 NMUR2Q9GZQ4 415 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 CHODLQ9H9P2 273 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 MALT1Q9UDY8 824 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 ATP23Q9Y6H3 246 aa17.07■□□□□ 0.32
SMPDL3A-202ENST00000487215 SVEP1Q4LDE5 3571 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 SLC35F4A4IF30 521 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 TMEM114B3SHH9 223 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 TMEM233B4DJY2 109 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 ITGA5P08648 1049 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 FAM153BP0C7A2 387 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 PTGR1Q14914 329 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 GPR68Q15743 365 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 ZNF141Q15928 474 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 FAM153CQ494X1 144 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 C10orf107Q8IVU9 208 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 TMEM234Q8WY98 164 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 MOAP1Q96BY2 351 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 TRMOQ9BU70 441 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 ACER3Q9NUN7 267 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 MID2Q9UJV3 735 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 KCNS2Q9ULS6 477 aa17.06■□□□□ 0.32
SMPDL3A-202ENST00000487215 PLCE1Q9P212 2302 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 VWC2LB2RUY7 222 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 PIP5K1BO14986 540 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 TFPIP10646 304 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 BMP4P12644 408 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 PGCP20142 388 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 MAPK1P28482 360 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 RPS26P62854 115 aaKnown RBP17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 CHRNB3Q05901 458 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 GGTLC2Q14390 218 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 LSM12Q3MHD2 195 aaKnown RBP17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 UGT3A2Q3SY77 523 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 OR7E24Q6IFN5 339 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 FAM166AQ6J272 317 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 OLIG3Q7RTU3 272 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 WDR31Q8NA23 367 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 OR52E4Q8NGH9 312 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 PIGXQ8TBF5 258 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 ZHX1-C8orf76Q96EF9 292 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 DNAJA3Q96EY1 480 aa17.05■□□□□ 0.32
SMPDL3A-202ENST00000487215 SERHL2Q9H4I8 314 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms