RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 FXYD4P59646 89 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 KIR2DS5Q14953 304 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 MRPL2Q5T653 305 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 IL17RDQ8NFM7 739 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 ZBTB8AQ96BR9 441 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 RBM24Q9BX46 236 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PTTG3PQ9NZH4 202 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 DIMT1Q9UNQ2 313 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 CDHR4A6H8M9 788 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 GPR75O95800 540 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 RPL35P42766 123 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 KCNJ10P78508 379 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 MBTPS1Q14703 1052 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 HBMQ6B0K9 141 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 APOOLQ6UXV4 268 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 CPT1CQ8TCG5 803 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PLEKHA3Q9HB20 300 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 GPRIN2O60269 458 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 SDC3O75056 442 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 GAAP10253 952 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 IRF2P14316 349 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 LYPD4Q6UWN0 246 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 MCATQ8IVS2 390 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR7G1Q8NGA0 311 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR5D14Q8NGL3 314 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR13C2Q8NGS9 318 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 POC1BQ8TC44 478 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 TEX37Q96LM6 180 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 NECTIN4Q96NY8 510 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 RTP3Q9BQQ7 232 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 KCNIP1Q9NZI2 227 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 BLACEA4D250 179 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 CSO75390 466 aaKnown RBP15.36■□□□□ 0.05
COL7A1-210ENST00000487017 ATG12O94817 140 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR7A5Q15622 319 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 GPR139Q6DWJ6 353 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR7G2Q8NG99 324 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR2A12Q8NGT7 310 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 OR14K1Q8NGZ2 314 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 PLEKHJ1Q9NW61 149 aa15.36■□□□□ 0.05
COL7A1-210ENST00000487017 XCR1P46094 333 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 IL13RA1P78552 427 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SQSTM1Q13501 440 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 TSSK4Q6SA08 328 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 GLB1L2Q8IW92 636 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 PRR18Q8N4B5 295 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SGCZQ96LD1 299 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 OR5B2Q96R09 309 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 TPSD1Q9BZJ3 242 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 ASIC5Q9NY37 505 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 GDE1Q9NZC3 331 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 IGLV3-10A0A075B6K4 115 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF529Q6P280 563 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 TBPL2Q6SJ96 375 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 TMEM207Q6UWW9 146 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 LMNTD1Q8N9Z9 388 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 OR56B4Q8NH76 319 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 INSM2Q96T92 566 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 A4GALTQ9NPC4 353 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SPATA6Q9NWH7 488 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 MMP12P39900 470 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 XKR7Q5GH72 579 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 KDM4DQ6B0I6 523 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 FCRLAQ7L513 359 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 GPR78Q96P69 363 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SPIN2AQ99865 258 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SPIN2BQ9BPZ2 258 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 VDAC3Q9Y277 283 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 TJP1Q07157 1748 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 MYH9P35579 1960 aaKnown RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 MYO18AQ92614 2054 aaKnown RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SLC16A7O60669 478 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 ELAVL4P26378 380 aaKnown RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 OTX2P32243 289 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SFTPDP35247 375 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 HTR3AP46098 478 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 CAV2P51636 162 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 GPR18Q14330 331 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 MBOAT2Q6ZWT7 520 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 OR5M11Q96RB7 305 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 PRDM9Q9NQV7 894 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 RBFOX1Q9NWB1 397 aaKnown RBP15.35■□□□□ 0.05
COL7A1-210ENST00000487017 SUSD2Q9UGT4 822 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 METTL15A6NJ78 407 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 A8MVJ9 347 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 P2RX6O15547 441 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 LCATP04180 440 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 CXADRP78310 365 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 COX20Q5RI15 118 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 RTL10Q7L3V2 364 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 LIX1LQ8IVB5 337 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 ZNF695Q8IW36 515 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 FAM109AQ8N4B1 249 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 NIPSNAP1Q9BPW8 284 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 CXorf36Q9H7Y0 433 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 CACNA1SQ13698 1873 aa15.35■□□□□ 0.05
COL7A1-210ENST00000487017 EPHA1P21709 976 aa15.34■□□□□ 0.05
COL7A1-210ENST00000487017 ARNTP27540 789 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms