RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SLC19A2O60779 497 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 PRAMEF2O60811 474 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CDC123O75794 336 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 IFNGP01579 166 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 F8A1P23610 371 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 PSMD4P55036 377 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 TAS2R43P59537 309 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CRYZQ08257 329 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 MADCAM1Q13477 382 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 RIN1Q13671 783 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 FAM53BQ14153 422 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF267Q14586 743 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ULK3Q6PHR2 472 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CYB561A3Q8NBI2 242 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 RCBTB1Q8NDN9 531 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 NLGN4YQ8NFZ3 816 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 SMPDL3BQ92485 455 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 TCTN2Q96GX1 697 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 SPACA7Q96KW9 195 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 G6PC3Q9BUM1 346 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ITGB1BP2Q9UKP3 347 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CLDN16Q9Y5I7 305 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 TRIOO75962 3097 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 MEIOCA2RUB1 952 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CLDN4O14493 209 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 KRT8P05787 483 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 SLC2A2P11168 524 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 GPR3P46089 330 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ATP12AP54707 1039 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ACTC1P68032 377 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ACTA1P68133 377 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 MAT1AQ00266 395 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF85Q03923 595 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 POU4F2Q12837 409 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 TRAM1Q15629 374 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.55■□□□□ 0.246e-6■□□□□ 8.6
PDLIM7-207ENST00000486828 KIRREL2Q6UWL6 708 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CMIPQ8IY22 773 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CADM2Q8N3J6 435 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 Q8N402 240 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 MAP3K3Q99759 626 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 CTRCQ99895 268 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 MALT1Q9UDY8 824 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 SERTAD3Q9UJW9 196 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 FBXL4Q9UKA2 621 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 ZMIZ1Q9ULJ6 1067 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 TMEM131Q92545 1883 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 A8MU76 341 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 E9PI62 339 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 CAPZA2P47755 286 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 NKX2-5P52952 324 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 BTG2P78543 158 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 CSTF1Q05048 431 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 IL18Q14116 193 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 ERV3-1Q14264 604 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 P2RY14Q15391 338 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 TRIQKQ629K1 86 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 ARL9Q6T311 187 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 VASH1Q7L8A9 365 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 NR2C2APQ86WQ0 139 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 FAM174AQ8TBP5 190 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 MSANTD3Q96H12 275 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 C4orf36Q96KX1 117 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 LRFN5Q96NI6 719 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 NEK6Q9HC98 313 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 PCDHGB7Q9Y5F8 929 aa16.54■□□□□ 0.24
PDLIM7-207ENST00000486828 EFCAB7A8K855 629 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 B4DXG7 233 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 TFECO14948 347 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 NDUFB2O95178 105 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 TRAPPC2P0DI81 140 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 TRAPPC2BP0DI82 140 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CT45A8P0DMV1 189 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CT45A9P0DMV2 189 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CHRNB1P11230 501 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 NR4A2P43354 598 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CAPZBP47756 277 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 GPR143P51810 404 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 GAS6Q14393 721 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CT45A2Q5DJT8 189 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ATAD3CQ5T2N8 411 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 HBMQ6B0K9 141 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 C19orf18Q8NEA5 215 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF486Q96H40 463 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF578Q96N58 590 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ERMAPQ96PL5 475 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 MKKSQ9NPJ1 570 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 CHRNA9Q9UGM1 479 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 J3QLW9 94 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF749O43361 778 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 GYPBP06028 91 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF19P17023 458 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 DDOSTP39656 456 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 KIR2DL3P43628 341 aa16.53■□□□□ 0.24
PDLIM7-207ENST00000486828 FASLGP48023 281 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms