RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TP73O15350 636 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
U2AF1-211ENST00000486519 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
U2AF1-211ENST00000486519 RP2O75695 350 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 KNG1P01042 644 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 CRYAAP02489 173 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 ASMTP46597 345 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 SEC24CP53992 1094 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
U2AF1-211ENST00000486519 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.04□□□□□ -0.32
U2AF1-211ENST00000486519 DCAF12L2Q5VW00 463 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 RAPH1Q70E73 1250 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 JAZF1Q86VZ6 243 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 SYT14Q8NB59 555 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 CEP70Q8NHQ1 597 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 APIPQ96GX9 242 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 KCNS3Q9BQ31 491 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 ZNF442Q9H7R0 627 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 EMC3Q9P0I2 261 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 ZNF225Q9UK10 706 aa13.04□□□□□ -0.32
U2AF1-211ENST00000486519 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 A0A1W2PQD3 144 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 M0QZ24 198 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 SCDO00767 359 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 SSTR1P30872 391 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 P2RX1P51575 399 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 PDK3Q15120 406 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 DUSP5Q16690 384 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 SLC25A53Q5H9E4 307 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 ZNF311Q5JNZ3 666 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 C11orf87Q6NUJ2 197 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 TMPPEQ6ZT21 453 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 ZNF551Q7Z340 670 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 MTDHQ86UE4 582 aaKnown RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 PTGR2Q8N8N7 351 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-211ENST00000486519 NUP37Q8NFH4 326 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 RFWD2Q8NHY2 731 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 UBE2FQ969M7 185 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 AMDHD1Q96NU7 426 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 C3orf14Q9HBI5 128 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 UBQLN4Q9NRR5 601 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 GIN1Q9NXP7 522 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 PCTPQ9UKL6 214 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 MMP24Q9Y5R2 645 aa13.03□□□□□ -0.32
U2AF1-211ENST00000486519 SULT2B1O00204 365 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 PLXNB1O43157 2135 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 WNT11O96014 354 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 ACHEP22303 614 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 RELBQ01201 579 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 MAD2L1BPQ15013 274 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 QPRTQ15274 297 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 TBRG1Q3YBR2 411 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 SPATC1Q76KD6 591 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 MISPQ8IVT2 679 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 SAMD14Q8IZD0 417 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 FAM110DQ8TAY7 271 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 LRRC39Q96DD0 335 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 PHF21BQ96EK2 531 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 C16orf58Q96GQ5 468 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 ARL5BQ96KC2 179 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 MRPL37Q9BZE1 423 aaKnown RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-211ENST00000486519 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 ACTL7BQ9Y614 415 aa13.02□□□□□ -0.33
U2AF1-211ENST00000486519 GNG14A0A1W2PPG7 69 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 SYCE1LA8MT33 242 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 J3QLI3 93 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 IGLV1-44P01699 117 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 HPGDP15428 266 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 MPGP29372 298 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 ALDH3B1P43353 468 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 FNTAP49354 379 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 SLC16A1P53985 500 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 MVKQ03426 396 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 GGTA1PQ4G0N0 100 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 C3orf33Q6P1S2 294 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 C17orf107Q6ZR85 190 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 CDC26Q8NHZ8 85 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 RHEBL1Q8TAI7 183 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 RDH5Q92781 318 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 GPR78Q96P69 363 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 CPNE1Q99829 537 aa13.01□□□□□ -0.33
U2AF1-211ENST00000486519 NELFAQ9H3P2 528 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms