RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GRINAQ7Z429 371 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 PMM1Q92871 262 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 NINJ1Q92982 152 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 ZC3HAV1LQ96H79 300 aaKnown RBP11.51□□□□□ -0.57
CHMP3-208ENST00000486404 MAGEB18Q96M61 343 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 KLHL9Q9P2J3 617 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
CHMP3-208ENST00000486404 ABCA4P78363 2273 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 A0A096LPI6 279 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 FAM221AA4D161 298 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 SULT2B1O00204 365 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 DNAJA2O60884 412 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 BCAS1O75363 584 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 FESP07332 822 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 PPP3CBP16298 524 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 ENPP1P22413 925 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 HTR3AP46098 478 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 IDH2P48735 452 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 MRPL19P49406 292 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 RAC3P60763 192 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 IRX1P78414 480 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 FADDQ13158 208 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 SQLEQ14534 574 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 LARS2Q15031 903 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 PAMR1Q6UXH9 720 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 BEND4Q6ZU67 534 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF550Q7Z398 422 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF440Q8IYI8 595 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 SLC43A2Q8N370 569 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 OR52P1PQ8NH57 321 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 CNOT9Q92600 299 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 ZG16BQ96DA0 208 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 MTHFD2LQ9H903 347 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-208ENST00000486404 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 CTPS2Q9NRF8 586 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 EMC3Q9P0I2 261 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 PLEKHA6Q9Y2H5 1048 aa11.5□□□□□ -0.57
CHMP3-208ENST00000486404 F8P00451 2351 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CFAP73A6NFT4 308 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 AP3D1O14617 1153 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 RAF1P04049 648 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 HRGP04196 525 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CD1EP15812 388 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CCNA2P20248 432 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 PPIBP23284 216 aaKnown RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 DIO1P49895 249 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 ATP4BP51164 291 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 POLR2HP52434 150 aaKnown RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 COPZ1P61923 177 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 RASGEF1BQ0VAM2 473 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 KEAP1Q14145 624 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 AGKQ53H12 422 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF836Q6ZNA1 936 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 SLC38A5Q8WUX1 472 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 GTF2H4Q92759 462 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 PIK3IP1Q96FE7 263 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 TMEM19Q96HH6 336 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 WFIKKN1Q96NZ8 548 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 SIKE1Q9BRV8 207 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CCDC106Q9BWC9 280 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 RABEP2Q9H5N1 569 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 NPHS2Q9NP85 383 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 C6orf203Q9P0P8 240 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 TRIM33Q9UPN9 1127 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF443Q9Y2A4 671 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-208ENST00000486404 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
CHMP3-208ENST00000486404 CELSR1Q9NYQ6 3014 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 CLIC1O00299 241 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 SMAD9O15198 467 aaKnown RBP11.48□□□□□ -0.57
CHMP3-208ENST00000486404 YES1P07947 543 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 NCF2P19878 526 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-208ENST00000486404 IL32P24001 234 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 FKBP2P26885 142 aaKnown RBP11.48□□□□□ -0.57
CHMP3-208ENST00000486404 MVDP53602 400 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 IST1P53990 364 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 EPS8Q12929 822 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 RGNQ15493 299 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 ZSWIM7Q19AV6 140 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 GCNT6Q5T4J0 391 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 RNF220Q5VTB9 566 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 AP1ARQ63HQ0 302 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 ANKRD34AQ69YU3 496 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 TFAP2EQ6VUC0 442 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 TMPPEQ6ZT21 453 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms