RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 THBS4P35443 961 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ALDH9A1P49189 494 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 TMEM33P57088 247 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 PRPS1P60891 318 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ATP6V0D1P61421 351 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 NAAAQ02083 359 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 POU3F1Q03052 451 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 HGFACQ04756 655 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 PDK3Q15120 406 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 CD226Q15762 336 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 FAM189A2Q15884 450 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SLC9B1Q4ZJI4 515 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 KLF17Q5JT82 389 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 OLFML2AQ68BL7 652 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 TTC27Q6P3X3 843 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 RAD9BQ6WBX8 426 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SPATC1Q76KD6 591 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 PAGE2Q7Z2X7 111 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SPATA21Q7Z572 469 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 NUP37Q8NFH4 326 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 FBXO27Q8NI29 283 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 FAM110DQ8TAY7 271 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 CKAP2Q8WWK9 683 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ZNF665Q9H7R5 613 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SEC61A2Q9H9S3 476 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 HHATLQ9HCP6 504 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 Q9N2J8 555 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 DYNLRB1Q9NP97 96 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ZNF275Q9NSD4 429 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 NUDT4Q9NZJ9 180 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 KLHL21Q9UJP4 597 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ACOT9Q9Y305 439 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 CCDC151A5D8V7 595 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 UBXN8O00124 270 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 COQ9O75208 318 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 H6PDO95479 791 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 CRYAAP02489 173 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 PCGF2P35227 344 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 PSMD4P55036 377 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 COL10A1Q03692 680 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 TOMM34Q15785 309 aaPredicted RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 TAF9Q16594 264 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 HIKESHIQ53FT3 197 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 GLE1Q53GS7 698 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 STEAP4Q687X5 459 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 C16orf87Q6PH81 154 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 CCBE1Q6UXH8 406 aaPredicted RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 ZAR1Q86SH2 424 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 ATP6V1C2Q8NEY4 427 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 B4GALNT2Q8NHY0 566 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 FBXO30Q8TB52 745 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 RDH5Q92781 318 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 EXOSC8Q96B26 276 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 BOD1Q96IK1 185 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 UBXN10Q96LJ8 280 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 ATOH8Q96SQ7 321 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 GPA33Q99795 319 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 NAT9Q9BTE0 207 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 LMF2Q9BU23 707 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 FAIM2Q9BWQ8 316 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 CAB39LQ9H9S4 337 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 BEX1Q9HBH7 125 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 PFDN4Q9NQP4 134 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 PLEK2Q9NYT0 353 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 AHSPQ9NZD4 102 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 EMC3Q9P0I2 261 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 CRNNQ9UBG3 495 aaPredicted RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 MRTO4Q9UKD2 239 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 NUP50Q9UKX7 468 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 C19orf53Q9UNZ5 99 aaPredicted RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 NOSIPQ9Y314 301 aaKnown RBP7.06□□□□□ -1.28
XRN1-212ENST00000486211 ACTL7BQ9Y614 415 aa7.06□□□□□ -1.28
XRN1-212ENST00000486211 A0A087WV62 115 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 UPK1AO00322 258 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 PPIHO43447 177 aaKnown RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 NCR1O76036 304 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 NGFP01138 241 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 IGLV1-44P01699 117 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 FGGP02679 453 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 CECR9P0C854 216 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 GATA3P23771 443 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 SLC7A1P30825 629 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 RAG2P55895 527 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 TRA2BP62995 288 aaKnown RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 ZNF117Q03924 483 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 DLG1Q12959 904 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 SELENBP1Q13228 472 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 FRG1Q14331 258 aaKnown RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 SLC29A2Q14542 456 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 HLXQ14774 488 aaPredicted RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 ZNF311Q5JNZ3 666 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 ZNF362Q5T0B9 420 aaPredicted RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 RNASEH2BQ5TBB1 312 aaKnown RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 FRG2Q64ET8 278 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 RUSC1-AS1Q66K80 236 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 CAVIN1Q6NZI2 390 aaKnown RBP7.05□□□□□ -1.28
XRN1-212ENST00000486211 ANKRD16Q6P6B7 361 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 IKBIPQ70UQ0 350 aa7.05□□□□□ -1.28
XRN1-212ENST00000486211 ISCA2Q86U28 154 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms