RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TIGITQ495A1 244 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 NADK2Q4G0N4 442 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 RABGAP1LQ5R372 815 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 GALNT17Q6IS24 598 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 FAHD2BQ6P2I3 314 aaPredicted RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 BLOC1S2Q6QNY1 142 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 CES3Q6UWW8 571 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 ZFP2Q6ZN57 461 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 APTXQ7Z2E3 356 aaKnown RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 KRTAP13-1Q8IUC0 172 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SUMF2Q8NBJ7 301 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 DENND6BQ8NEG7 585 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 PNPT1Q8TCS8 783 aaKnown RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 RAET1EQ8TD07 263 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 AENQ8WTP8 325 aaKnown RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SPRYD4Q8WW59 207 aaPredicted RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 FAHD2AQ96GK7 314 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 TMEM101Q96IK0 257 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SMIM14Q96QK8 99 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 OR5B2Q96R09 309 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SLC6A7Q99884 636 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 CITED1Q99966 193 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 PPDPFQ9H3Y8 114 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 MMP26Q9NRE1 261 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 WRAP73Q9P2S5 460 aaPredicted RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 SPRR3Q9UBC9 169 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 LCMT1Q9UIC8 334 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 RIMS3Q9UJD0 308 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 NAP1L2Q9ULW6 460 aaPredicted RBP1.95□□□□□ -2.1
GCFC2-209ENST00000486016 OARD1Q9Y530 152 aa1.95□□□□□ -2.1
GCFC2-209ENST00000486016 LOC100131303A0A0U1RQF7 123 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 DHRS7CA6NNS2 312 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 FCN1O00602 326 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TBX19O60806 448 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 ICOSLGO75144 302 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 BCAS1O75363 584 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 CA1P00915 261 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 STSP08842 583 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PGCP20142 388 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 SERPINA2P20848 420 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PTMSP20962 102 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PSMA5P28066 241 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 ADSSP30520 456 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 NUDT1P36639 197 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 RGS4P49798 205 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 MRPS11P82912 194 aaKnown RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 RAB40BQ12829 278 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 SELPLGQ14242 412 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PTGES3Q15185 160 aaKnown RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TAF7Q15545 349 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PDK4Q16654 411 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TPD52L1Q16890 204 aaPredicted RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TATDN3Q17R31 274 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 GGTA1PQ4G0N0 100 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 OR5M10Q6IEU7 315 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PYHIN1Q6K0P9 492 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TMEM61Q8N0U2 210 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 LRRC43Q8N309 656 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 C15orf54Q8N8G6 183 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 C20orf203Q8NBC4 194 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 GMCL1P1Q8NEA9 526 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 OR2A12Q8NGT7 310 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 BLOC1S5Q8TDH9 187 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 DEDD2Q8WXF8 326 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 FAM3CQ92520 227 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 RPL3LQ92901 407 aaKnown RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 NEIL2Q969S2 332 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 C12orf66Q96MD2 445 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 CYP2S1Q96SQ9 504 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 SLC17A9Q9BYT1 436 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 CRNKL1Q9BZJ0 848 aaKnown RBP1.94□□□□□ -2.1
GCFC2-209ENST00000486016 TMEM117Q9H0C3 514 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 OR1A1Q9P1Q5 309 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 GNG12Q9UBI6 72 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 WDR45Q9Y484 360 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 OR10H1Q9Y4A9 318 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 SLCO1B1Q9Y6L6 691 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 PLEKHG1Q9ULL1 1385 aa1.94□□□□□ -2.1
GCFC2-209ENST00000486016 FRMPD4Q14CM0 1322 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 IGLV4-60A0A075B6I1 120 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 PP2D1A8MPX8 630 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 ZNF705EA8MWA4 302 aaPredicted RBP1.93□□□□□ -2.1
GCFC2-209ENST00000486016 MSH4O15457 936 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 IQCF3P0C7M6 154 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 RPA2P15927 270 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 MAGP20916 626 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 VDAC1P21796 283 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 UQCRC2P22695 453 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 CD1BP29016 333 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 CD80P33681 288 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 GCKP35557 465 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 HPCAL1P37235 193 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 CSTF1Q05048 431 aaKnown RBP1.93□□□□□ -2.1
GCFC2-209ENST00000486016 LY6EQ16553 131 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 SYPL1Q16563 259 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 FAM71F2Q6NXP2 309 aa1.93□□□□□ -2.1
GCFC2-209ENST00000486016 FAM199XQ6PEV8 388 aaPredicted RBP1.93□□□□□ -2.1
GCFC2-209ENST00000486016 IGFL1Q6UW32 110 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms