RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 A0A0G2JPF8 293 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ZNF724A8MTY0 619 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HNRNPCL2B2RXH8 293 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HNRNPCL3B7ZW38 293 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 NPIPA7E9PJI5 369 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TNFSF11O14788 317 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ZNF208O43345 1280 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 DNPH1O43598 174 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HNRNPCL1O60812 293 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 H6PDO95479 791 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CNOT4O95628 575 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 NUDT14O95848 222 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HRGP04196 525 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 DBIP07108 87 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 YES1P07947 543 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TFPTP0C1Z6 253 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 NPIPA8P0DM63 369 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HNRNPCL4P0DMR1 293 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 POU2F1P14859 743 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HOXB9P17482 250 aaPredicted RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 PSMB1P20618 241 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 CRYGSP22914 178 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TCEA1P23193 301 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 UGT2B10P36537 528 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CDKN2CP42773 168 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CPA2P48052 419 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 IDH3AP50213 366 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ATP4BP51164 291 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CTBP2P56545 445 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 CHRNEQ04844 493 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 FOXF1Q12946 379 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 SNTB1Q13884 538 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 GNA13Q14344 377 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 QPRTQ15274 297 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 MAPK11Q15759 364 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ZNF239Q16600 458 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 TIGD2Q4W5G0 525 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 NXNQ6DKJ4 435 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 C3orf33Q6P1S2 294 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TMPPEQ6ZT21 453 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 PLEKHM3Q6ZWE6 761 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 SSX8Q7RTT4 187 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 GRINAQ7Z429 371 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 STK32CQ86UX6 486 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TMEM200AQ86VY9 491 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 RNF130Q86XS8 419 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ADGRG3Q86Y34 549 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 FUNDC1Q8IVP5 155 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ZNF440Q8IYI8 595 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CLEC4FQ8N1N0 589 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CNEP1R1Q8N9A8 125 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 LRRC8CQ8TDW0 803 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TSPEARQ8WU66 669 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CKAP2Q8WWK9 683 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 RAB8BQ92930 207 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ITCHQ96J02 903 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 MARK4Q96L34 752 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 WFIKKN1Q96NZ8 548 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 GPATCH1Q9BRR8 931 aaKnown RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 INPP5KQ9BT40 448 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 CCDC106Q9BWC9 280 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 OPN3Q9H1Y3 402 aaPredicted RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 RAD21L1Q9H4I0 556 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 PIF1Q9H611 641 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 COQ10BQ9H8M1 238 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TPT1P8Q9HAU6 139 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 BCO1Q9HAY6 547 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TCF7L2Q9NQB0 619 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ZNF226Q9NYT6 803 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 ST6GALNAC2Q9UJ37 374 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TRAPPC4Q9Y296 219 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 GPR52Q9Y2T5 361 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 IFT52Q9Y366 437 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 HDGFL3Q9Y3E1 203 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 TESMINQ9Y4I5 508 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 SPIN1Q9Y657 262 aaPredicted RBP6.25□□□□□ -1.41
VPS50-218ENST00000485994 PLCE1Q9P212 2302 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 UQCRHLA0A096LP55 91 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 CENPVL1A0A0U1RR11 272 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 POLR3GO15318 223 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 GMFGO60234 142 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 CYTIPO60759 359 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 DIAPH2O60879 1101 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS50-218ENST00000485994 PMS2P2O95744 297 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 PLGP00747 810 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 CHRM4P08173 479 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 UBTFL6P0CB48 400 aaPredicted RBP6.24□□□□□ -1.41
VPS50-218ENST00000485994 NR2F1P10589 423 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 IL7RP16871 459 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 ENPP1P22413 925 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 DNASE1P24855 282 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SHC1P29353 583 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 SLC1A3P43003 542 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 IST1P53990 364 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 CRISP3P54108 245 aa6.24□□□□□ -1.41
VPS50-218ENST00000485994 NME5P56597 212 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms