RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	ZSCAN12	O43309	604 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	OR1F1	O43749	312 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	LCMT2	O60294	686 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	SNX4	O95219	450 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	H2BFM	P0C1H6	154 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	SDC1	P18827	310 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	NT5E	P21589	574 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	TBXA2R	P21731	343 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CALB2	P22676	271 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	RPS12	P25398	132 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ATP5A1	P25705	553 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CA8	P35219	290 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	RPL4	P36578	427 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	SULT1E1	P49888	294 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	AP3M2	P53677	418 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	PLA2G16	P53816	162 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ATP5I	P56385	69 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	RPS6	P62753	249 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	PJVK	Q0ZLH3	352 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ZMYND11	Q15326	602 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CAMK4	Q16566	473 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	MAPK6	Q16659	721 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	PCK2	Q16822	640 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	MICA	Q29983	383 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	SNAI3	Q3KNW1	292 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CELF3	Q5SZQ8	465 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	LGSN	Q5TDP6	509 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ZC2HC1B	Q5TFG8	222 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	OR8G2P	Q6IF36	304 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	PMF1	Q6P1K2	205 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024		Q6ZPB1	254 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	C16orf62	Q7Z3J2	963 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CCDC50	Q8IVM0	306 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF679	Q8IYX0	411 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ANKFN1	Q8N957	763 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNRF1	Q8ND25	227 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	OR10A7	Q8NGE5	316 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	OR2T3	Q8NH03	318 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	FLVCR1-AS1	Q8TAF5	88 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	FNDC8	Q8TC99	324 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	AEN	Q8WTP8	325 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CRYGN	Q8WXF5	182 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	EMG1	Q92979	244 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	DNAJA3	Q96EY1	480 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	SH3YL1	Q96HL8	342 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF597	Q96LX8	424 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	LRRC61	Q9BV99	259 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	DUSP16	Q9BY84	665 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CRNKL1	Q9BZJ0	848 aa	Known RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	POLR3F	Q9H1D9	316 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	VCX2	Q9H322	139 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	GPN2	Q9H9Y4	310 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CALHM2	Q9HA72	323 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	APMAP	Q9HDC9	416 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	NTNG1	Q9Y2I2	539 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	MOB4	Q9Y3A3	225 aa		3.14	□□□□□ -1.91
VPS8-223	ENST00000485024	CARMIL3	Q8ND23	1372 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RGPD5	Q99666	1765 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM240B	A0A1B0GVZ2	78 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024		H7C423	109 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	UBXN8	O00124	270 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	CXCL11	O14625	94 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PVR	P15151	417 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PGC	P20142	388 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	IGFBP5	P24593	272 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	MS4A2	Q01362	244 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	OTUD4	Q01804	1114 aa	Known RBP	3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	CNTN2	Q02246	1040 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RGS1	Q08116	209 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RIPPLY1	Q0D2K3	151 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	SYPL1	Q16563	259 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	C14orf28	Q4W4Y0	310 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	MS4A13	Q5J8X5	152 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF506	Q5JVG8	444 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PNCK	Q6P2M8	343 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF841	Q6ZN19	808 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	LANCL3	Q6ZV70	420 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	APTX	Q7Z2E3	356 aa	Known RBP	3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ACOT1	Q86TX2	421 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PARG	Q86W56	976 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	C15orf54	Q8N8G6	183 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	CSNK1G2-AS1	Q8NCQ2	148 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	BHLHE23	Q8NDY6	225 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	STXBP6	Q8NFX7	210 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	OR13C2	Q8NGS9	318 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	NANP	Q8TBE9	248 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	SSC4D	Q8WTU2	575 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	OSTF1	Q92882	214 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	SLC41A3	Q96GZ6	507 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PLIN2	Q99541	437 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RIT2	Q99578	217 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RPP25	Q9BUL9	199 aa	Known RBP	3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	CAPS2	Q9BXY5	557 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	PUS3	Q9BZE2	481 aa	Known RBP	3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	HEXA-AS1	Q9H8Q6	139 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ELOVL3	Q9HB03	270 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM120C	Q9NX05	1096 aa	Known RBP	3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ELOVL2	Q9NXB9	296 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	EHF	Q9NZC4	300 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms