RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MED17Q9NVC6 651 aa18.59■□□□□ 0.57
VCPKMT-203ENST00000484763 FBXL2Q9UKC9 423 aa18.59■□□□□ 0.57
VCPKMT-203ENST00000484763 MED31Q9Y3C7 131 aa18.59■□□□□ 0.57
VCPKMT-203ENST00000484763 LRRC42Q9Y546 428 aa18.59■□□□□ 0.57
VCPKMT-203ENST00000484763 FAM47E-STBD1D6RA91 191 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 PIP5K1CO60331 668 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 MITFO75030 526 aaPredicted RBP18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 TRIM3O75382 744 aaPredicted RBP18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 POU2F1P14859 743 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 PRKCAP17252 672 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 PTNP21246 168 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 CNR1P21554 472 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 HTR3AP46098 478 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 KCNAB2Q13303 367 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 NHSL2Q5HYW2 709 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 ARSKQ6UWY0 536 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 ZER1Q7Z7L7 766 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 GALNT5Q7Z7M9 940 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 HAS2Q92819 552 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 C1GALT1C1Q96EU7 318 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 JSRP1Q96MG2 331 aaPredicted RBP18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 RAB26Q9ULW5 256 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 VDAC3Q9Y277 283 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 C15orf41Q9Y2V0 281 aa18.58■□□□□ 0.57
VCPKMT-203ENST00000484763 CNTRLQ7Z7A1 2325 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 A0A0G2JMM0 328 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 A0A1W2PPB8 328 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 A0A1W2PRS3 328 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 KIR3DP1A8MWS1 328 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 ETV2O00321 342 aaPredicted RBP18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 OMPP47874 163 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 POLR2HP52434 150 aaKnown RBP18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 DLX5P56178 289 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 ARG2P78540 354 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 TLE3Q04726 772 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 TIGD3Q6B0B8 471 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 PRICKLE2Q7Z3G6 844 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 MDS2Q8NDY4 140 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 PFN4Q8NHR9 129 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 ADI1Q9BV57 179 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 TOR3AQ9H497 397 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 ENOPH1Q9UHY7 261 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 OSGIN1Q9UJX0 560 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 PCDHGB6Q9Y5F9 930 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 AP4B1Q9Y6B7 739 aa18.58■□□□□ 0.56
VCPKMT-203ENST00000484763 CACNA1AO00555 2505 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 KPNA4O00629 521 aaPredicted RBP18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 CXCR1P25024 350 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 MERTKQ12866 999 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 PLPPR5Q32ZL2 321 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 ZIK1Q3SY52 487 aaPredicted RBP18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 PARP8Q8N3A8 854 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 GNPDA2Q8TDQ7 276 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 FAM46AQ96IP4 442 aaKnown RBP18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 SLC19A3Q9BZV2 496 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 DEPPQ9NTK1 212 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 TMEM5Q9Y2B1 443 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 FRYQ5TBA9 3013 aa18.57■□□□□ 0.56
VCPKMT-203ENST00000484763 GSTM3P21266 225 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 GPR85P60893 370 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 PRKCDQ05655 676 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 C6orf52Q5T4I8 152 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 WLSQ5T9L3 541 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 KLHL17Q6TDP4 642 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 IGFL2Q6UWQ7 119 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 LRRC69Q6ZNQ3 347 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 DHRSXQ8N5I4 330 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 MRGPRX4Q96LA9 322 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 MBOAT4Q96T53 435 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 FAM173AQ9BQD7 235 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 TMEM43Q9BTV4 400 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 UCK2Q9BZX2 261 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 MEPEQ9NQ76 525 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 A0A087WZY1 265 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CBR3O75828 277 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 IFI30P13284 250 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CD46P15529 392 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 FPR3P25089 353 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CTBP2P56545 445 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 DSCR4P56555 118 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 COX10Q12887 443 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 FOXF1Q12946 379 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 TSPAN31Q12999 210 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 TAF11Q15544 211 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 SLC25A53Q5H9E4 307 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CD300LDQ6UXZ3 194 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 LSRQ86X29 649 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CDK20Q8IZL9 346 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CYGBQ8WWM9 190 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 C5orf34Q96MH7 638 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 GNRHR2Q96P88 292 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 GABARAPL3Q9BY60 117 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 RIBC2Q9H4K1 309 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 Q9H521 79 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 C20orf141Q9NUB4 165 aa18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 BOKQ9UMX3 212 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 KLF13Q9Y2Y9 288 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-203ENST00000484763 IGKV1D-42A0A075B6H8 117 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms