RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF614Q8N883 585 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 SPATA4Q8NEY3 305 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 OR5W2Q8NH69 310 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 FAM76AQ8TAV0 307 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 FAM216AQ8WUB2 273 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 CHMP6Q96FZ7 201 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 NAPGQ99747 312 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 SLC7A10Q9NS82 523 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 CA10Q9NS85 328 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 IGHV1-18A0A0C4DH31 117 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 B9A039 149 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 NPIPB8E9PQR5 432 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 H3BNH8 94 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF264O43296 627 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 MRPL33O75394 65 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 OR4A8P0C604 315 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 UBL4AP11441 157 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CREB1P16220 341 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 TAC1P20366 129 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ATP6V1C1P21283 382 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 IDH3GP51553 393 aaPredicted RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 SLC16A1P53985 500 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ATP12AP54707 1039 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 SESN3P58005 492 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CSNK2A1P68400 391 aaPredicted RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 MERTKQ12866 999 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CBFBQ13951 182 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 LASP1Q14847 261 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 KIAA0040Q15053 153 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 HIKESHIQ53FT3 197 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 SYT14P1Q58G82 188 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 DCST2Q5T1A1 773 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 TSPO2Q5TGU0 170 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ZCCHC12Q6PEW1 402 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 VHLLQ6RSH7 139 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CASP12Q6UXS9 341 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PEG10Q86TG7 708 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 C17orf78Q8N4C9 275 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 C1orf162Q8NEQ5 155 aaPredicted RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 TOR1AIP2Q8NFQ8 470 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CLHC1Q8NHS4 586 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ZFP28Q8NHY6 868 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PPCDCQ96CD2 204 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ARL5BQ96KC2 179 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 STACQ99469 402 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PAFAH2Q99487 392 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 THUMPD3Q9BV44 507 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 HOXD1Q9GZZ0 328 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PIGUQ9H490 435 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PLK3Q9H4B4 646 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 GSTO2Q9H4Y5 243 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 TNFRSF12AQ9NP84 129 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 MID1IP1Q9NPA3 183 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 DUSP22Q9NRW4 184 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 ZCCHC3Q9NUD5 404 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 DTNAQ9Y4J8 743 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CCL27Q9Y4X3 112 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 PTGDR2Q9Y5Y4 395 aa9.45□□□□□ -0.9
SMARCC1-205ENST00000483847 CENPVL1A0A0U1RR11 272 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 GPR171O14626 319 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 TMPRSS2O15393 492 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 EIF4E2O60573 245 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 DNAJA2O60884 412 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 SEC22BO75396 215 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 RSL1D1O76021 490 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 SNUPNO95149 360 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 IGFBP1P08833 259 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 TFPIP10646 304 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 CDH2P19022 906 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 ATP5F1P24539 256 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 PHBP35232 272 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 PPOXP50336 477 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 PRKAA2P54646 552 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 HILS1P60008 231 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 PRPS1P60891 318 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 SKP2Q13309 424 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 RIN1Q13671 783 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 PDE7AQ13946 482 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 EFNB3Q15768 340 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 AWAT1Q58HT5 328 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF418Q8TF45 676 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 DCAKDQ8WVC6 231 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 L3HYPDHQ96EM0 354 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 ZNF764Q96H86 408 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 TSSK3Q96PN8 268 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 OR11A1Q9GZK7 315 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 RAB1BQ9H0U4 201 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 REEP4Q9H6H4 257 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 ACSS1Q9NUB1 689 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 ZDHHC18Q9NUE0 388 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 SH3BP4Q9P0V3 963 aa9.44□□□□□ -0.9
SMARCC1-205ENST00000483847 UPB1Q9UBR1 384 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms