RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RLIMQ9NVW2 624 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 KLHL28Q9NXS3 571 aa14.04□□□□□ -0.16
RPP40-206ENST00000483546 PLEKHB1Q9UF11 243 aaPredicted RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 MCTS1Q9ULC4 181 aaKnown RBP14.04□□□□□ -0.16
RPP40-206ENST00000483546 KIAA1549Q9HCM3 1950 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 FAM220BPB1ANY3 271 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 AIM2O14862 343 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CLDN1O95832 211 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CTSSP25774 331 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 SLC7A1P30825 629 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 OPRM1P35372 400 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 EIF1AXP47813 144 aaKnown RBP14.03□□□□□ -0.16
RPP40-206ENST00000483546 IDH2P48735 452 aaKnown RBP14.03□□□□□ -0.16
RPP40-206ENST00000483546 HBMQ6B0K9 141 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 WBP2NLQ6ICG8 309 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CCDC80Q76M96 950 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CLIP4Q8N3C7 705 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 TNIP2Q8NFZ5 429 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 OR10D3Q8NH80 312 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CPNE4Q96A23 557 aaPredicted RBP14.03□□□□□ -0.16
RPP40-206ENST00000483546 SFXN3Q9BWM7 321 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 TRIM8Q9BZR9 551 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 KCNJ16Q9NPI9 418 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CHRNA9Q9UGM1 479 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 SLC13A4Q9UKG4 626 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
RPP40-206ENST00000483546 A0A0J9YW62 118 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 SYT5O00445 386 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 AP3D1O14617 1153 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 ZNF208O43345 1280 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 EFNA2O43921 213 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 ADAM11O75078 769 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 MFN2O95140 757 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 SYNGR4O95473 234 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 C8BP07358 591 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 TMIGD3P0DMS9 266 aaPredicted RBP14.02□□□□□ -0.17
RPP40-206ENST00000483546 SFTPDP35247 375 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 ACAA2P42765 397 aaKnown RBP14.02□□□□□ -0.17
RPP40-206ENST00000483546 NUDT2P50583 147 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 POLR2HP52434 150 aaKnown RBP14.02□□□□□ -0.17
RPP40-206ENST00000483546 CARD18P57730 90 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 PON3Q15166 354 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.17
RPP40-206ENST00000483546 CCDC71Q8IV32 467 aaPredicted RBP14.02□□□□□ -0.17
RPP40-206ENST00000483546 C9orf106Q8NAJ2 232 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 CCDC197Q8NCU1 140 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 ZNF524Q96C55 264 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 LRRC46Q96FV0 321 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 ZNF583Q96ND8 569 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 TMEM185BQ9H7F4 350 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 GLRX2Q9NS18 164 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 COL12A1Q99715 3063 aa14.02□□□□□ -0.17
RPP40-206ENST00000483546 A1L4Q6 167 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 KDM4EB2RXH2 506 aaPredicted RBP14.01□□□□□ -0.17
RPP40-206ENST00000483546 H0YC42 278 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 M0QX08 132 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 TNFSF11O14788 317 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 TGM6O95932 706 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 IFNA14P01570 189 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 IL11P20809 199 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 HTR1EP28566 365 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 AQP1P29972 269 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 ZNF136P52737 540 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 TPD52P55327 224 aaPredicted RBP14.01□□□□□ -0.17
RPP40-206ENST00000483546 TMEM176BQ3YBM2 270 aaPredicted RBP14.01□□□□□ -0.17
RPP40-206ENST00000483546 SYT14P1Q58G82 188 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 GTF2IRD2BQ6EKJ0 949 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 GTF2IRD2Q86UP8 949 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 SLC15A3Q8IY34 581 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 LSMEM1Q8N8F7 131 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 NAXEQ8NCW5 288 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 OR2T12Q8NG77 320 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 ZNF845Q96IR2 970 aaPredicted RBP14.01□□□□□ -0.17
RPP40-206ENST00000483546 PRRG4Q9BZD6 226 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 ADAM19Q9H013 955 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 RNF122Q9H9V4 155 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 C12orf10Q9HB07 376 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 NDE1Q9NXR1 346 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 TESQ9UGI8 421 aaKnown RBP14.01□□□□□ -0.17
RPP40-206ENST00000483546 HDGFL3Q9Y3E1 203 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 HCFC1P51610 2035 aa14.01□□□□□ -0.17
RPP40-206ENST00000483546 ASH1LQ9NR48 2969 aaKnown RBP14□□□□□ -0.17
RPP40-206ENST00000483546 TMED7-TICAM2A0A0A6YYA0 188 aa14□□□□□ -0.17
RPP40-206ENST00000483546 PRSS44E7EML9 344 aa14□□□□□ -0.17
RPP40-206ENST00000483546 DNPH1O43598 174 aa14□□□□□ -0.17
RPP40-206ENST00000483546 CXCL13O43927 109 aa14□□□□□ -0.17
RPP40-206ENST00000483546 GKN3PP0CG01 181 aa14□□□□□ -0.17
RPP40-206ENST00000483546 TACR3P29371 465 aa14□□□□□ -0.17
RPP40-206ENST00000483546 MNAT1P51948 309 aa14□□□□□ -0.17
RPP40-206ENST00000483546 RAC3P60763 192 aa14□□□□□ -0.17
RPP40-206ENST00000483546 NCALDP61601 193 aa14□□□□□ -0.17
RPP40-206ENST00000483546 CSNK2A1P68400 391 aaPredicted RBP14□□□□□ -0.17
RPP40-206ENST00000483546 ADGRG3Q86Y34 549 aa14□□□□□ -0.17
RPP40-206ENST00000483546 FNDC9Q8TBE3 224 aa14□□□□□ -0.17
RPP40-206ENST00000483546 SLC26A7Q8TE54 656 aa14□□□□□ -0.17
RPP40-206ENST00000483546 FIG4Q92562 907 aa14□□□□□ -0.17
RPP40-206ENST00000483546 OSTF1Q92882 214 aa14□□□□□ -0.17
RPP40-206ENST00000483546 DDIT4LQ96D03 193 aa14□□□□□ -0.17
RPP40-206ENST00000483546 TRIM2Q9C040 744 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms