RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ZNF485Q8NCK3 441 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 NFAM1Q8NET5 270 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 BBS1Q8NFJ9 593 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TP53INP1Q96A56 240 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TNFRSF13CQ96RJ3 184 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 CARD8Q9Y2G2 431 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IGKV1D-42A0A075B6H8 117 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 D6RAR5 112 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 J3QRE1 110 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 GTPBP1O00178 669 aaKnown RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ALOX12BO75342 701 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 HEXBP07686 556 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PEPDP12955 493 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ABCD3P28288 659 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 SLC6A6P31641 620 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IL11RAQ14626 422 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF528Q3MIS6 628 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ARMC4Q5T2S8 1044 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 SHISA6Q6ZSJ9 500 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 BORCS5Q969J3 196 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 OMA1Q96E52 524 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TMEM43Q9BTV4 400 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 CENPOQ9BU64 300 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 SLC26A1Q9H2B4 701 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 FBXO8Q9NRD0 319 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 CDC14CA4D256 554 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SOCS6O14544 535 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 APOL3O95236 402 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 CYC1P08574 325 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 CPEP16870 476 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 MST1P26927 711 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SOX3P41225 446 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SLC6A8P48029 635 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 RNF4P78317 190 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
CPNE1-225ENST00000483495 FAAH2Q6GMR7 532 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 MEPCEQ7L2J0 689 aaKnown RBP12.11□□□□□ -0.47
CPNE1-225ENST00000483495 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 ZBTB46Q86UZ6 589 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 PTP4A1Q93096 173 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-225ENST00000483495 LRFN5Q96NI6 719 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 RTN4RQ9BZR6 473 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 APMAPQ9HDC9 416 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 OCIAD1Q9NX40 245 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 SEC14L4Q9UDX3 406 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 A3GALT2U3KPV4 340 aa12.11□□□□□ -0.47
CPNE1-225ENST00000483495 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 FAM183AA6NL82 134 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 EIF4E2O60573 245 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 GPX5O75715 221 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OR7A10O76100 309 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 NDUFB2O95178 105 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OPRL1P41146 370 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SLC1A3P43003 542 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 CRYBB2P43320 205 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 FOXL2P58012 376 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 RPS4XP62701 263 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SLC35F1Q5T1Q4 408 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PHF19Q5T6S3 580 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ARHGAP11AQ6P4F7 1023 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 NUP54Q7Z3B4 507 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PSD4Q8NDX1 1056 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OR4F15Q8NGB8 312 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 OR6Q1Q8NGQ2 317 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 SPSB2Q99619 263 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ADAM19Q9H013 955 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 AKIP1Q9NQ31 210 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
CPNE1-225ENST00000483495 CHRNA9Q9UGM1 479 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF337Q9Y3M9 751 aa12.1□□□□□ -0.47
CPNE1-225ENST00000483495 ADAMTS9Q9P2N4 1935 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms