RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.456e-8■■□□□ 11.5
VARS-226ENST00000483275 POU2F3Q9UKI9 436 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 MKLN1Q9UL63 735 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
VARS-226ENST00000483275 OR5H1A6NKK0 313 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 TMEM114B3SHH9 223 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 M0R1B8 84 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 SULT2B1O00204 365 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 SPAG7O75391 227 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 ZNF16P17020 682 aaPredicted RBP12.25□□□□□ -0.45
VARS-226ENST00000483275 CCNA2P20248 432 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 NTF4P34130 210 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 VSNL1P62760 191 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 IFFO1Q0D2I5 559 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 MAPK14Q16539 360 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 TIMM23BQ5SRD1 257 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 PODNL1Q6PEZ8 512 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 SLC22A25Q6T423 547 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 GALNT5Q7Z7M9 940 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 FNDC5Q8NAU1 212 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 PSMA8Q8TAA3 256 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 APOPT1Q96IL0 206 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 PPP1R36Q96LQ0 422 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 RHNO1Q9BSD3 238 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 BARX1Q9HBU1 254 aaPredicted RBP12.25□□□□□ -0.45
VARS-226ENST00000483275 FAIMQ9NVQ4 179 aa12.25□□□□□ -0.45
VARS-226ENST00000483275 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CIB4A0PJX0 185 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CCT8L1PA6NM43 557 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
VARS-226ENST00000483275 EIF4E2O60573 245 aaKnown RBP12.24□□□□□ -0.45
VARS-226ENST00000483275 UGT2B17O75795 530 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CSTAP01040 98 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 C1QCP02747 245 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 MAPK1P28482 360 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 RYKP34925 604 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 ATP6AP1LQ52LC2 224 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 SYT14P1Q58G82 188 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 WDR93Q6P2C0 686 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 EMBQ6PCB8 327 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CLEC2AQ6UVW9 174 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
VARS-226ENST00000483275 IL17RELQ6ZVW7 336 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 ANKRD46Q86W74 232 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 ARIH2OSQ8N7S6 290 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 OR52E4Q8NGH9 312 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 RAB8BQ92930 207 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 SLC35G5Q96KT7 338 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 PPP3R2Q96LZ3 170 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 TRMOQ9BU70 441 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 CTPS2Q9NRF8 586 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 ATAD3AQ9NVI7 634 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
VARS-226ENST00000483275 TLDC2A0PJX2 215 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 CLDN24A6NM45 220 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ZNF724A8MTY0 619 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 NPHS1O60500 1241 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 IFNA2P01563 188 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 KRT16P08779 473 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 G6PDP11413 515 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 CD40P25942 277 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 TTKP33981 857 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 RPL3P39023 403 aaKnown RBP12.23□□□□□ -0.45
VARS-226ENST00000483275 SLC25A3Q00325 362 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 PLAURQ03405 335 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 LSM12Q3MHD2 195 aaKnown RBP12.23□□□□□ -0.45
VARS-226ENST00000483275 AGAP6Q5VW22 663 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 OR4F3Q6IEY1 312 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 TNFAIP8L2Q6P589 184 aaPredicted RBP12.23□□□□□ -0.45
VARS-226ENST00000483275 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 C16orf62Q7Z3J2 963 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 RIMKLAQ8IXN7 391 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 COQ8BQ96D53 544 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ARL5BQ96KC2 179 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ADAD1Q96M93 576 aaKnown RBP12.23□□□□□ -0.45
VARS-226ENST00000483275 DUSP26Q9BV47 211 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 NMUR2Q9GZQ4 415 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 LAT2Q9GZY6 243 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 OR51I1Q9H343 314 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 EMC3Q9P0I2 261 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 ZDHHC2Q9UIJ5 367 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 MID2Q9UJV3 735 aa12.23□□□□□ -0.45
VARS-226ENST00000483275 NOSIPQ9Y314 301 aaKnown RBP12.23□□□□□ -0.45
VARS-226ENST00000483275 KIAA0513O60268 411 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 STX11O75558 287 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 PGM3O95394 542 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 ITGA5P08648 1049 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 DDX5P17844 614 aaKnown RBP12.22□□□□□ -0.45
VARS-226ENST00000483275 MATN1P21941 496 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 FABP6P51161 128 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 FUT5Q11128 374 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 ZNF141Q15928 474 aa12.22□□□□□ -0.45
VARS-226ENST00000483275 NRF1Q16656 503 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms