RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PRSS44E7EML9 344 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 DVL2O14641 736 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 TNFSF11O14788 317 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 SHOX2O60902 331 aaPredicted RBP18.79■□□□□ 0.6
SEC13-217ENST00000482647 TGM6O95932 706 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 CTSSP25774 331 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 PCGF2P35227 344 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 PON3Q15166 354 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 VMACQ2NL98 169 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 CTU2Q2VPK5 515 aaKnown RBP18.79■□□□□ 0.6
SEC13-217ENST00000482647 OR2A2Q6IF42 318 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 C3orf33Q6P1S2 294 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 POMZP3Q6PJE2 187 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 DHRS4L2Q6PKH6 230 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 PLXDC2Q6UX71 529 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 PATL1Q86TB9 770 aaKnown RBP18.79■□□□□ 0.6
SEC13-217ENST00000482647 CALHM3Q86XJ0 350 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 NAXEQ8NCW5 288 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 FIG4Q92562 907 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 OSTF1Q92882 214 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 REXO5Q96IC2 774 aaKnown RBP18.79■□□□□ 0.6
SEC13-217ENST00000482647 GPATCH1Q9BRR8 931 aaKnown RBP18.79■□□□□ 0.6
SEC13-217ENST00000482647 CHST11Q9NPF2 352 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 SLC13A4Q9UKG4 626 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 ICE1Q9Y2F5 2266 aa18.79■□□□□ 0.6
SEC13-217ENST00000482647 M0QX08 132 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 CXCL13O43927 109 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 MFN2O95140 757 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 SYNGR4O95473 234 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 TMIGD3P0DMS9 266 aaPredicted RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 FCGR2AP12318 317 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 FKBP2P26885 142 aaKnown RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 SLC7A1P30825 629 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 OPRM1P35372 400 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 ACAA2P42765 397 aaKnown RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 PCBP3P57721 371 aaKnown RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 SLC25A35Q3KQZ1 300 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 EEF1A1P5Q5VTE0 462 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 ERICH5Q6P6B1 374 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 HACD2Q6Y1H2 254 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 LIX1LQ8IVB5 337 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 FNDC9Q8TBE3 224 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 SLC25A43Q8WUT9 341 aaPredicted RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 INTS12Q96CB8 462 aaKnown RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 ZNF583Q96ND8 569 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 PRRG4Q9BZD6 226 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 UCK2Q9BZX2 261 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 CTPS2Q9NRF8 586 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 KLHL28Q9NXS3 571 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 CHRNA9Q9UGM1 479 aa18.78■□□□□ 0.6
SEC13-217ENST00000482647 MCTS1Q9ULC4 181 aaKnown RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 NCOA6Q14686 2063 aaPredicted RBP18.78■□□□□ 0.6
SEC13-217ENST00000482647 FAM90A27PA6NNH2 459 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 TPST1O60507 370 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 IL18BPO95998 194 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 PRG2P13727 222 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 BMP5P22003 454 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 SHC1P29353 583 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 TACR3P29371 465 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 NUDT2P50583 147 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 POLR2HP52434 150 aaKnown RBP18.77■□□□□ 0.6
SEC13-217ENST00000482647 MAP2K6P52564 334 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 ZNF136P52737 540 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 WBP2NLQ6ICG8 309 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 PPP4R4Q6NUP7 873 aa18.77■□□□□ 0.6
SEC13-217ENST00000482647 PHF3Q92576 2039 aaKnown RBP18.77■□□□□ 0.6
SEC13-217ENST00000482647 TMED7-TICAM2A0A0A6YYA0 188 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 GCM2O75603 506 aaPredicted RBP18.76■□□□□ 0.59
SEC13-217ENST00000482647 DMTNQ08495 405 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 VEZF1Q14119 521 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 ADGRG3Q86Y34 549 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 CADM2Q8N3J6 435 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 SLC26A7Q8TE54 656 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 SFXN3Q9BWM7 321 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 ADAM19Q9H013 955 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 EVA1AQ9H8M9 152 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 RNF122Q9H9V4 155 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 CMTM6Q9NX76 183 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 OSGIN1Q9UJX0 560 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 TMED7Q9Y3B3 224 aa18.76■□□□□ 0.59
SEC13-217ENST00000482647 ADGRG4Q8IZF6 3080 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 NKX2-6A6NCS4 301 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 CCT8L1PA6NM43 557 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 FAM220BPB1ANY3 271 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 NDUFAB1O14561 156 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 FRS3O43559 492 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 CRHP06850 196 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 TFPIP10646 304 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 CLK1P49759 484 aaKnown RBP18.75■□□□□ 0.59
SEC13-217ENST00000482647 FOXF2Q12947 444 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 SYT14P1Q58G82 188 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 SP5Q6BEB4 398 aaPredicted RBP18.75■□□□□ 0.59
SEC13-217ENST00000482647 C8orf82Q6P1X6 216 aaPredicted RBP18.75■□□□□ 0.59
SEC13-217ENST00000482647 CCDC80Q76M96 950 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 SLC15A3Q8IY34 581 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 GCNT2Q8N0V5 402 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 SMYD1Q8NB12 490 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 CCDC197Q8NCU1 140 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 OR2T12Q8NG77 320 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 CPNE4Q96A23 557 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms