RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZNF814B7Z6K7 855 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 C9JVG2 144 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 FESP07332 822 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 TFPIP10646 304 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 EDNRAP25101 427 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 OR3A2P47893 321 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 DIO1P49895 249 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 KHKP50053 298 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ANXA11P50995 505 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 WDR4P57081 412 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 KCNJ10P78508 379 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 LRRC74AQ0VAA2 488 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 TAB1Q15750 504 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 FAM174BQ3ZCQ3 159 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 SPANXN4Q5MJ08 99 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 NCMAPQ5T1S8 102 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 HHATQ5VTY9 493 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 OGFOD2Q6N063 350 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ADAM5Q6NVV9 412 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 Q6ZT83 130 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 GALNT5Q7Z7M9 940 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF100Q8IYN0 542 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF775Q96BV0 537 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ZHX1-C8orf76Q96EF9 292 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 NEURL3Q96EH8 262 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 COX4I2Q96KJ9 171 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 PANX1Q96RD7 426 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 LAMP3Q9UQV4 416 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 RNF115Q9Y4L5 304 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 FLNAP21333 2647 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 MTORP42345 2549 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 E9PBE3 544 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 SMAD9O15198 467 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CLOCKO15516 846 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 KIAA0513O60268 411 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 H6PDO95479 791 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CNOT4O95628 575 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 LY6G6DO95868 133 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 IL12AP29459 219 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 RYKP34925 604 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CLK1P49759 484 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 TXNL4AP83876 142 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 BST1Q10588 318 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 PDK3Q15120 406 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 FRRS1Q6ZNA5 592 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 GRINAQ7Z429 371 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 SPATA19Q7Z5L4 167 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 RAB3IL1Q8TBN0 382 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 FBXW5Q969U6 566 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 ZG16BQ96DA0 208 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 MUCL1Q96DR8 90 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CCDC115Q96NT0 180 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF300Q96RE9 604 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 EXOSC3Q9NQT5 275 aaKnown RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CTPS2Q9NRF8 586 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 EMC3Q9P0I2 261 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 PRSS50Q9UI38 385 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 LIPT1Q9Y234 373 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 ACANP16112 2415 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 PRR14LQ5THK1 2151 aa11.92□□□□□ -0.5
CTDSP1-208ENST00000482272 CCDC154A6NI56 674 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 TRPC5OSA6NMA1 111 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 SDHDO14521 159 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 ADAM11O75078 769 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 HTR3AP46098 478 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 ATP5J2P56134 94 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 NME5P56597 212 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 UFM1P61960 85 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 RPS4XP62701 263 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 CHRNEQ04844 493 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 GNA13Q14344 377 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF621Q6ZSS3 439 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 P2RY8Q86VZ1 359 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 RNF130Q86XS8 419 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 CMIPQ8IY22 773 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 FAM71CQ8NEG0 241 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 PIWIL2Q8TC59 973 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 PMM1Q92871 262 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 TRMT61AQ96FX7 289 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 TRNT1Q96Q11 434 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 OR52E6Q96RD3 313 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 ZBTB18Q99592 522 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 AIG1Q9NVV5 245 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 THAP1Q9NVV9 213 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 CHRNA9Q9UGM1 479 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms