RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ARFIP1P53367 373 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 KCNJ10P78508 379 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 TMEM184AQ6ZMB5 413 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 SLC16A12Q6ZSM3 486 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 PEG10Q86TG7 708 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 OR51Q1Q8NH59 317 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 YIPF6Q96EC8 236 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 S100A16Q96FQ6 103 aaKnown RBP10.53□□□□□ -0.72
SMPD4-218ENST00000482171 FBXL3Q9UKT7 428 aa10.53□□□□□ -0.72
SMPD4-218ENST00000482171 NRG2O14511 850 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CASC3O15234 703 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TLX3O43711 291 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PRKYO43930 277 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GREM1O60565 184 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 MAOAP21397 527 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GIPRP48546 466 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 MRPL19P49406 292 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GPR143P51810 404 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF41P51814 821 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PDX1P52945 283 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ARL14Q8N4G2 192 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 EID2Q8N6I1 236 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 NSMAFQ92636 917 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 DIO2Q92813 273 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TEX101Q9BY14 249 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TRPV4Q9HBA0 871 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 LAMP5Q9UJQ1 280 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 NDRG4Q9ULP0 352 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CKAP5Q14008 2032 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 H3BML4 177 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 VAMP1P23763 118 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 SLC6A9P48067 706 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GDI2P50395 445 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 OR1D5P58170 312 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CTXN1P60606 82 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZP2Q05996 745 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 SERTAD2Q14140 314 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GAS6Q14393 721 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 KIAA0040Q15053 153 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 FCN2Q15485 313 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF627Q7L945 461 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 INO80EQ8NBZ0 244 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TRMT10AQ8TBZ6 339 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ACOT11Q8WXI4 607 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PELOQ9BRX2 385 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PIGUQ9H490 435 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 THSD1Q9NS62 852 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CUTCQ9NTM9 273 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TXNL4BQ9NX01 149 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 AKR7A2O43488 359 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TFP02787 698 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PITPNBP48739 271 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TGM4P49221 684 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CEBPGP53567 150 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 KIAA1024LP59773 190 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZMAT1Q5H9K5 638 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 NXNL2Q5VZ03 156 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TMEM225Q6GV28 225 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TSSK4Q6SA08 328 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 TMEM92Q6UXU6 159 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GALNTL5Q7Z4T8 443 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 GID4Q8IVV7 300 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PDZD9Q8IXQ8 264 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 MFSD4AQ8N468 514 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF615Q8N8J6 731 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 AMER3Q8N944 861 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 SDR9C7Q8NEX9 313 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 UPB1Q9UBR1 384 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 OSGIN1Q9UJX0 560 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF443Q9Y2A4 671 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 NOP16Q9Y3C1 178 aaKnown RBP10.52□□□□□ -0.73
SMPD4-218ENST00000482171 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CACNG2Q9Y698 323 aa10.52□□□□□ -0.73
SMPD4-218ENST00000482171 CREBL2O60519 120 aaPredicted RBP10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ITGA10O75578 1167 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 TACSTD2P09758 323 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 BSGP35613 385 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 MAP3K8P41279 467 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 CTBP2P56545 445 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 MLLT11Q13015 90 aaPredicted RBP10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ARMC10Q8N2F6 343 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 BOLLQ8N9W6 283 aaKnown RBP10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ACOT12Q8WYK0 555 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 BPIFA2Q96DR5 249 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF304Q9HCX3 659 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 VNN3Q9NY84 501 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 TDRD6O60522 2096 aaKnown RBP10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ANK1P16157 1881 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 MYO16Q9Y6X6 1858 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 DICER1Q9UPY3 1922 aaKnown RBP10.51□□□□□ -0.73
SMPD4-218ENST00000482171 WDR90Q96KV7 1748 aa10.51□□□□□ -0.73
SMPD4-218ENST00000482171 ZNF670-ZNF695F2Z2N8 137 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms