RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZNF583Q96ND8 569 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 UCK2Q9BZX2 261 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 COQ10BQ9H8M1 238 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 EXOSC3Q9NQT5 275 aaKnown RBP9.51□□□□□ -0.89
SSBP1-210ENST00000481508 THUMPD1Q9NXG2 353 aaKnown RBP9.51□□□□□ -0.89
SSBP1-210ENST00000481508 CALML5Q9NZT1 146 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 CLCF1Q9UBD9 225 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 ADAM21Q9UKJ8 722 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 CORO2BQ9UQ03 480 aa9.51□□□□□ -0.89
SSBP1-210ENST00000481508 NKX2-6A6NCS4 301 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 CD8B2A6NJW9 211 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 FAM90A27PA6NNH2 459 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 C5orf58C9J3I9 102 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 FAM47E-STBD1D6RA91 191 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 EIF1AYO14602 144 aaKnown RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 TNFSF11O14788 317 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 FAM107AO95990 144 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 CEACAM8P31997 349 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 PCGF2P35227 344 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 SFTPDP35247 375 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 GCKP35557 465 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 IDH2P48735 452 aaKnown RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 ZNF136P52737 540 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 DLX5P56178 289 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 BCL2A1Q16548 175 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 ZNF311Q5JNZ3 666 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 CMIPQ8IY22 773 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 ZNF808Q8N4W9 903 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 METTL25Q8N6Q8 603 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 RELL2Q8NC24 303 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 HIPK4Q8NE63 616 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 OR10D3Q8NH80 312 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-210ENST00000481508 RND1Q92730 232 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 PMM1Q92871 262 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 TAMM41Q96BW9 452 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 DTNBP1Q96EV8 351 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 DNAJA3Q96EY1 480 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 PINK1Q9BXM7 581 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 SRXN1Q9BYN0 137 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 CTPS2Q9NRF8 586 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 ACER3Q9NUN7 267 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 MRGBPQ9NV56 204 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 ANGPT4Q9Y264 503 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 AP4B1Q9Y6B7 739 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 RTTNQ86VV8 2226 aa9.5□□□□□ -0.89
SSBP1-210ENST00000481508 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 TMEM247A6NEH6 219 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 FAM220BPB1ANY3 271 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 TMEM229AB2RXF0 380 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 NME4O00746 187 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 CXCL13O43927 109 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 TPST2O60704 377 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 AQP8O94778 261 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 MFN2O95140 757 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 ETS2P15036 469 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PGCP20142 388 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 CCNA2P20248 432 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 CD247P20963 164 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 HTR2AP28223 471 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PRDX6P30041 224 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PRKAR1BP31321 381 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PTGER4P35408 488 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 EIF1P41567 113 aaKnown RBP9.49□□□□□ -0.89
SSBP1-210ENST00000481508 NUDT2P50583 147 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 SLC7A2P52569 658 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 RAC1P63000 192 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 MERTKQ12866 999 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 GNA13Q14344 377 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 LARS2Q15031 903 aaKnown RBP9.49□□□□□ -0.89
SSBP1-210ENST00000481508 VMACQ2NL98 169 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 RIPPLY2Q5TAB7 128 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 TMEM211Q6ICI0 200 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 MTFR2Q6P444 385 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 DHRS4L2Q6PKH6 230 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 GRAMD2AQ8IUY3 354 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 LACC1Q8IV20 430 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 SLC15A3Q8IY34 581 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 LILRA2Q8N149 483 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 MEIOBQ8N635 442 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 SMYD1Q8NB12 490 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PCYOX1LQ8NBM8 494 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 C11orf65Q8NCR3 313 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 OR4D11Q8NGI4 311 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 OR10Q1Q8NGQ4 319 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 ZNF563Q8TA94 476 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 FNDC9Q8TBE3 224 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 ST8SIA1Q92185 356 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 MRGPRX4Q96LA9 322 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 CALHM2Q9HA72 323 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 HHATLQ9HCP6 504 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 GID8Q9NWU2 228 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 PACSIN3Q9UKS6 424 aa9.49□□□□□ -0.89
SSBP1-210ENST00000481508 FREM1Q5H8C1 2179 aa9.48□□□□□ -0.89
SSBP1-210ENST00000481508 TMEM72A0PK05 275 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms