RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CXorf56Q9H5V9 222 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 MID1IP1Q9NPA3 183 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GIN1Q9NXP7 522 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 KLHL28Q9NXS3 571 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 C6orf203Q9P0P8 240 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 MCTS1Q9ULC4 181 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GPR52Q9Y2T5 361 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 TIMM22Q9Y584 194 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ATRQ13535 2644 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.76□□□□□ -1.497e-6■□□□□ 9.3
LRCH3-216ENST00000481048 CR1P17927 2039 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 UQCRHLA0A096LP55 91 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 A0A1W2PQD3 144 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SLC28A1O00337 649 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SS18L1O75177 396 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 GLRA3O75311 464 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CRCPO75575 148 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 NKX2-2O95096 273 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 LY6G6DO95868 133 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ABHD16AO95870 558 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 PLGP00747 810 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 UROSP10746 265 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 MYL2P10916 166 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 HPGDP15428 266 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 PSMB1P20618 241 aaKnown RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ME2P23368 584 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 LOXP28300 417 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 GABRA3P34903 492 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 EIF1P41567 113 aaKnown RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 FRKP42685 505 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 MANFP55145 182 aaKnown RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CLDN20P56880 219 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SLC29A2Q14542 456 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 KIAA0040Q15053 153 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CFAP157Q5JU67 520 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CPTPQ5TA50 214 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 TMEM107Q6UX40 140 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ZYG11AQ6WRX3 759 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 FRMD7Q6ZUT3 714 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ESPNLQ6ZVH7 1005 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SSX8Q7RTT4 187 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 MTERF4Q7Z6M4 381 aaKnown RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 YTHDF3Q7Z739 585 aaKnown RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 MARCH3Q86UD3 253 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 TRABD2AQ86V40 505 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 IFT20Q8IY31 132 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 GTPBP8Q8N3Z3 284 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 NATD1Q8N6N6 113 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF611Q8N823 705 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 FAM110BQ8TC76 370 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 IGFBPL1Q8WX77 278 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 MTERF3Q96E29 417 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SMR3AQ99954 134 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 RTN4RQ9BZR6 473 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 KLHL4Q9C0H6 718 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 PPCSQ9HAB8 311 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 UBTD1Q9HAC8 227 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 TIGARQ9NQ88 270 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 UBQLN4Q9NRR5 601 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ACSS1Q9NUB1 689 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF701Q9NV72 531 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 PSMC3IPQ9P2W1 217 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-216ENST00000481048 TMED5Q9Y3A6 229 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 CCL27Q9Y4X3 112 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 SNX8Q9Y5X2 465 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 ARFGEF3Q5TH69 2177 aa5.76□□□□□ -1.49
LRCH3-216ENST00000481048 G3V2L1 256 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 H0YC42 278 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 H7C1Q1 480 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 KIF2AO00139 706 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 UBFD1O14562 309 aaKnown RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 HS3ST1O14792 307 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 SEC14L5O43304 696 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 RIPK2O43353 540 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 RGS14O43566 566 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 SEC22BO75396 215 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 NME6O75414 186 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 AQP8O94778 261 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 SYNGR4O95473 234 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 CHEK2O96017 543 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 NEFHP12036 1026 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 TCEA1P23193 301 aaKnown RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 ELK4P28324 431 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 CCKARP32238 428 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 CRHR1P34998 444 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 ASMTP46597 345 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 PTH2RP49190 550 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF41P51814 821 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 FOXA1P55317 472 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 TPD52P55327 224 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 SIRPAP78324 504 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 PPP2R2BQ00005 443 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 STX5Q13190 355 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 MLC1Q15049 377 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 RNPS1Q15287 305 aaKnown RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 ETFDHQ16134 617 aa5.75□□□□□ -1.49
LRCH3-216ENST00000481048 CTU2Q2VPK5 515 aaKnown RBP5.75□□□□□ -1.49
LRCH3-216ENST00000481048 GRAMD1BQ3KR37 738 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms