RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 METRNQ9UJH8 293 aa8.12□□□□□ -1.11
NUDCD3-208ENST00000480209 BOKQ9UMX3 212 aaPredicted RBP8.12□□□□□ -1.11
NUDCD3-208ENST00000480209 BOD1L1Q8NFC6 3051 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 SHANK1Q9Y566 2161 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 A0A087WUU8 490 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 A0A1W2PRQ8 180 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TMEM72A0PK05 275 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ZC3H12DA2A288 527 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TNFRSF11BO00300 401 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 EFNA2O43921 213 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 GADD45GO95257 159 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 H1F0P07305 194 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 FCGR1AP12314 374 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ITGA2P17301 1181 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 HK1P19367 917 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DPP4P27487 766 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PEX2P28328 305 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 MSX1P28360 303 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 SHC1P29353 583 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 SLC1A3P43003 542 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ZNF41P51814 821 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 EGR4Q05215 589 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 C19orf57Q0VDD7 668 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DGCR6Q14129 220 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TRAM2Q15035 370 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 HYAL4Q2M3T9 481 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DCST1Q5T197 706 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ZNF770Q6IQ21 691 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PODNL1Q6PEZ8 512 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 LINC00114Q6XXX2 140 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 GRINAQ7Z429 371 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 YRDCQ86U90 279 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ADGRG3Q86Y34 549 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 FAM83FQ8NEG4 500 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PFN4Q8NHR9 129 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 ST8SIA1Q92185 356 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TM9SF4Q92544 642 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DNAJA3Q96EY1 480 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 CENPNQ96H22 339 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 EPYCQ99645 322 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 FNDC11Q9BVV2 318 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TRIM2Q9C040 744 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 OR2B2Q9GZK3 357 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 POLR2J3Q9H1A7 115 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TSPAN10Q9H1Z9 355 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DCLRE1BQ9H816 532 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 REEP1Q9H902 201 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 TMEM27Q9HBJ8 222 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 MEPEQ9NQ76 525 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 OSGIN1Q9UJX0 560 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 DKKL1Q9UK85 242 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 OAZ3Q9UMX2 235 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 RPH3AQ9Y2J0 694 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 SAMHD1Q9Y3Z3 626 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PCDHGB7Q9Y5F8 929 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 PCDHGB6Q9Y5F9 930 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 SVILO95425 2214 aa8.11□□□□□ -1.11
NUDCD3-208ENST00000480209 A0A087WUJ7 227 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 TMED7-TICAM2A0A0A6YYA0 188 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SH3PXD2BA1X283 911 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 OR2M5A3KFT3 312 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 C7orf72A4D263 438 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 LRRN3E7EW58 273 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 PDLIM1O00151 329 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 KPNA4O00629 521 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SOCS2O14508 198 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 CASQ2O14958 399 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 ADAMDEC1O15204 470 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SUSD5O60279 629 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 DPM1O60762 260 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 CBR3O75828 277 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 THRBP10828 461 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 GP1BBP13224 206 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 HOXB6P17509 224 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 CCNA2P20248 432 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 FPR1P21462 350 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 PRKACGP22612 351 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SRD5A2P31213 254 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 HMGA2P52926 109 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 DSCR4P56555 118 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 PLGLB1Q02325 96 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 ST3GAL3Q11203 375 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 MERTKQ12866 999 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 ST3GAL2Q16842 350 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 PRR30Q53SZ7 412 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 CMPK2Q5EBM0 449 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 WIPI1Q5MNZ9 446 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SWT1Q5T5J6 900 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 LPCAT4Q643R3 524 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 SHQ1Q6PI26 577 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 TRILQ7L0X0 811 aa8.1□□□□□ -1.11
NUDCD3-208ENST00000480209 CYP4Z1Q86W10 505 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms