RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 COL4A2P08572 1712 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 NOTOA8MTQ0 251 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 LANCL1O43813 399 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 RFPL3O75679 317 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 ARL6IP5O75915 188 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 UBL3O95164 117 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 MRPL3P09001 348 aaKnown RBP22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 OR2T7P0C7T2 308 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 OR10A3P58181 314 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 EXOSC7Q15024 291 aaKnown RBP22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 TMEM52Q8NDY8 209 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 OR2T27Q8NH04 317 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 DEDD2Q8WXF8 326 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 PHYHIPQ92561 330 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 GHSRQ92847 366 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 BMFQ96LC9 184 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 CMTM3Q96MX0 182 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 DPAGT1Q9H3H5 408 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 GALNT9Q9HCQ5 603 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 NUBP2Q9Y5Y2 271 aa22.71■■□□□ 1.23
SYNGAP1-206ENST00000479510 HYAL3O43820 417 aaPredicted RBP22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 GATBO75879 557 aaKnown RBP22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 RASGRP1O95267 797 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 TFPIP10646 304 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 HOXB2P14652 356 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 PYCR1P32322 319 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 RAB38P57729 211 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 FAM27D1Q5T7N8 215 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 PARM1Q6UWI2 310 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 LINC00114Q6XXX2 140 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 ANKRD9Q96BM1 317 aaPredicted RBP22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 SIPA1Q96FS4 1042 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 MRPL48Q96GC5 212 aaKnown RBP22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 TNFRSF13CQ96RJ3 184 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 ABHD1Q96SE0 405 aa22.7■■□□□ 1.23
SYNGAP1-206ENST00000479510 TRBV23OR9-2A0A075B6M9 112 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 EEF1E1O43324 174 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 CPNE3O75131 537 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 CT62P0C5K7 136 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 HNRNPA2B1P22626 353 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 ACAA2P42765 397 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 MMP15P51511 669 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 SRP54P61011 504 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 YPEL5P62699 121 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 FHL1Q13642 323 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 CCDC85BQ15834 202 aaPredicted RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 NTRK2Q16620 822 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 IL20RBQ6UXL0 311 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 ZNF550Q7Z398 422 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 GRHL3Q8TE85 626 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 SMIM19Q96E16 107 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 SCMH1Q96GD3 660 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 GFM1Q96RP9 751 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 ZNF275Q9NSD4 429 aaPredicted RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 DNAJB12Q9NXW2 375 aaKnown RBP22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 PTTG3PQ9NZH4 202 aa22.7■■□□□ 1.22
SYNGAP1-206ENST00000479510 A0A0J9YY10 115 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 TMEM127O75204 238 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 OR2B3O76000 313 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 CBX7O95931 251 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 COL9A1P20849 921 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 BTCP35070 178 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 GBX2P52951 348 aaPredicted RBP22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 RAG2P55895 527 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 ZNHIT3Q15649 155 aaPredicted RBP22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 ASB18Q6ZVZ8 466 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 CSNK1A1LQ8N752 337 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 OR5J2Q8NH18 312 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 POT1Q9NUX5 634 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 WDR70Q9NW82 654 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 CHRNA9Q9UGM1 479 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 ICAM5Q9UMF0 924 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 DOCK8Q8NF50 2099 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 NDUFB2O95178 105 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 LGALS3BPQ08380 585 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 BTBD16Q32M84 506 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 ALG10BQ5I7T1 473 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 PRSS41Q7RTY9 318 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 CDH24Q86UP0 819 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 HAVCR2Q8TDQ0 301 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 FGF14Q92915 247 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 CNN2Q99439 309 aaKnown RBP22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 MED28Q9H204 178 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 EMC7Q9NPA0 242 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 STMN3Q9NZ72 180 aa22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 USP36Q9P275 1121 aaKnown RBP22.69■■□□□ 1.22
SYNGAP1-206ENST00000479510 ATG2AQ2TAZ0 1938 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 A0A1B0GTQ1 180 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 CLUP10909 449 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 ACVR1BP36896 505 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 CDK5R1Q15078 307 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 CLPPQ16740 277 aaPredicted RBP22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 SLC25A35Q3KQZ1 300 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 SLC36A2Q495M3 483 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 CCDC58Q4VC31 144 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 FCRLBQ6BAA4 426 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 ULK3Q6PHR2 472 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 OVCH1Q7RTY7 1134 aa22.68■■□□□ 1.22
SYNGAP1-206ENST00000479510 LRRC17Q8N6Y2 441 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms