RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HMGN4O00479 90 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 CPNE6O95741 557 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 TPMTP51580 245 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 S100A12P80511 92 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 SF3B4Q15427 424 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 OR13H1Q8NG92 308 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 TRMT10AQ8TBZ6 339 aaKnown RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 GABARAPL1Q9H0R8 117 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 CBLCQ9ULV8 474 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 A0A0G2JMP0 313 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 GAPDHSO14556 408 aaPredicted RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 H2BFMP0C1H6 154 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 UBL4AP11441 157 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 CD22P20273 847 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 MMP11P24347 488 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 KIAA1024LP59773 190 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 RPL19P84098 196 aaKnown RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 FGL1Q08830 312 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 ZNF584Q8IVC4 421 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 OR4M2Q8NGB6 313 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 THAP7Q9BT49 309 aaPredicted RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 SPNS1Q9H2V7 528 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 VSTM2BA6NLU5 285 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 CHRNB1P11230 501 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 BSGP35613 385 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 RGS19P49795 217 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 PDX1P52945 283 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SLC14A1Q13336 389 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 ZNF595Q8IYB9 648 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 LRRC56Q8IYG6 542 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 MRGPRX3Q96LB0 322 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SIAEQ9HAT2 523 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 PCDHGB2Q9Y5G2 931 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 OR2A25A4D2G3 310 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 ERVK-25P63136 954 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 OR13C2Q8NGS9 318 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 ATG5Q9H1Y0 275 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 RGCCQ9H4X1 137 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 MED17Q9NVC6 651 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SIDT1Q9NXL6 827 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 KCNN3Q9UGI6 736 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SPDEFO95238 335 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 UCHL1P09936 223 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 RPS5P46782 204 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 PTH2RP49190 550 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 DUSP3P51452 185 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 C3orf38Q5JPI3 329 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 METTL11BQ5VVY1 283 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 BCDIN3DQ7Z5W3 292 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SLC35F2Q8IXU6 374 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 C19orf47Q8N9M1 422 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 MFSD8Q8NHS3 518 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 TCTN2Q96GX1 697 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 ZNF582Q96NG8 517 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 PPA2Q9H2U2 334 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 EVA1AQ9H8M9 152 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 KLHL9Q9P2J3 617 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 A0A1W2PPL8 197 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 ALDOBP05062 364 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 SLC6A8P48029 635 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 RIDAP52758 137 aaKnown RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-206ENST00000479501 OR2A1Q8NGT9 310 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 BMFQ96LC9 184 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 LRIT1Q9P2V4 623 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 DHDHQ9UQ10 334 aa13.34□□□□□ -0.27
COL20A1-206ENST00000479501 FARS2O95363 451 aaKnown RBP13.33□□□□□ -0.27
COL20A1-206ENST00000479501 SCG5P05408 212 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 PET100P0DJ07 73 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 RBMXP38159 391 aaKnown RBP13.33□□□□□ -0.27
COL20A1-206ENST00000479501 ART1P52961 327 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 MAT1AQ00266 395 aaKnown RBP13.33□□□□□ -0.27
COL20A1-206ENST00000479501 ACSM3Q53FZ2 586 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 B3GLCTQ6Y288 498 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 RNF165Q6ZSG1 346 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 SLC37A2Q8TED4 501 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 VNN3Q9NY84 501 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 SNX11Q9Y5W9 270 aa13.33□□□□□ -0.27
COL20A1-206ENST00000479501 ANKRD33BA6NCL7 494 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 TRAPPC6AO75865 159 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 LGI1O95970 557 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 HCKP08631 526 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 EPHA2P29317 976 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 EIF2S3P41091 472 aaKnown RBP13.33□□□□□ -0.28
COL20A1-206ENST00000479501 SLC1A3P43003 542 aa13.33□□□□□ -0.28
COL20A1-206ENST00000479501 CLRN1P58418 232 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms