RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RAC3P60763 192 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 GNGT1P63211 74 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 VEZF1Q14119 521 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 GUSBP1Q15486 140 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 SGCBQ16585 318 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF311Q5JNZ3 666 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 INTS11Q5TA45 600 aaKnown RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 REP15Q6BDI9 236 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 GTF2IRD2BQ6EKJ0 949 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF836Q6ZNA1 936 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ARPINQ7Z6K5 226 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 MTDHQ86UE4 582 aaKnown RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 GTF2IRD2Q86UP8 949 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 SNX32Q86XE0 403 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CALHM3Q86XJ0 350 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 LIX1LQ8IVB5 337 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ANKS4BQ8N8V4 417 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 OR10D3Q8NH80 312 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 NFKBIDQ8NI38 313 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF563Q8TA94 476 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CMTM5Q96DZ9 223 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 PINK1Q9BXM7 581 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 MCTS1Q9ULC4 181 aaKnown RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ANGPT4Q9Y264 503 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 MPDZO75970 2070 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CACNA1DQ01668 2161 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 LOC100653049A0A140TA62 436 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 H0YC42 278 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 EIF1AYO14602 144 aaKnown RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 SEC14L5O43304 696 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 HNRNPRO43390 633 aaKnown RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 KRT34O76011 436 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 C8BP07358 591 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 PCGF2P35227 344 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 IDH2P48735 452 aaKnown RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 ASCL1P50553 236 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 MTPNP58546 118 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 MERTKQ12866 999 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 PON3Q15166 354 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 CYP51A1Q16850 503 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 HBMQ6B0K9 141 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 WBP2NLQ6ICG8 309 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 ERICH5Q6P6B1 374 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 CCDC80Q76M96 950 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 P4HA3Q7Z4N8 544 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 ADGRG3Q86Y34 549 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 SLC43A2Q8N370 569 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 LSMEM1Q8N8F7 131 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 OSTF1Q92882 214 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 HOPXQ9BPY8 73 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-217ENST00000479161 EFCAB1Q9HAE3 211 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 C12orf10Q9HB07 376 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 RLIMQ9NVW2 624 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 ARMCX1Q9P291 453 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 CHRNA9Q9UGM1 479 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 TRAPPC4Q9Y296 219 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 ITPR2Q14571 2701 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 TEX15Q9BXT5 2789 aa13.88□□□□□ -0.19
C9orf3-217ENST00000479161 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 TNFSF13O75888 250 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 MFN2O95140 757 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 SYNGR4O95473 234 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 COX4I1P13073 169 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 EIF1AXP47813 144 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 COPZ1P61923 177 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 GABPB1Q06547 395 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 RNPS1Q15287 305 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 VMACQ2NL98 169 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 TMEM176BQ3YBM2 270 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 SYT14P1Q58G82 188 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 RPS26P11Q5JNZ5 115 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 FAM91A1Q658Y4 838 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 ZZZ3Q8IYH5 903 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 CLIP4Q8N3C7 705 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 RELL2Q8NC24 303 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 OR10A6Q8NH74 314 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 FNDC9Q8TBE3 224 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 SMPDL3BQ92485 455 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 FIG4Q92562 907 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 REXO5Q96IC2 774 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 GMPPAQ96IJ6 420 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 ECSITQ9BQ95 431 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
C9orf3-217ENST00000479161 COQ10BQ9H8M1 238 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 ARL2BPQ9Y2Y0 163 aa13.87□□□□□ -0.19
C9orf3-217ENST00000479161 A0A1W2PNV4 684 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 TNFSF11O14788 317 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 MSTNO14793 375 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 PMS2P2O95744 297 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 CD8BP10966 210 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 BMP5P22003 454 aa13.86□□□□□ -0.19
C9orf3-217ENST00000479161 GRNP28799 593 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms