RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PAQR8Q8TEZ7 354 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 CA5BP1Q8WTZ4 195 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 FCAMRQ8WWV6 532 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 HIST1H2BAQ96A08 127 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 CLCC1Q96S66 551 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 TAS2R10Q9NYW0 307 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 SMAD9O15198 467 aaKnown RBP19.7■□□□□ 0.74
SDF4-206ENST00000478938 FADS1O60427 444 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 F11P03951 625 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 ASGR2P07307 311 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 MECP2P51608 486 aaKnown RBP19.7■□□□□ 0.74
SDF4-206ENST00000478938 STARD6P59095 220 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 RPS13P62277 151 aaKnown RBP19.7■□□□□ 0.74
SDF4-206ENST00000478938 TEX30Q5JUR7 227 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 OR52W1Q6IF63 320 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 ARRDC1Q8N5I2 433 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 TCTEX1D2Q8WW35 142 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 FAM46AQ96IP4 442 aaKnown RBP19.7■□□□□ 0.74
SDF4-206ENST00000478938 EDEM2Q9BV94 578 aa19.7■□□□□ 0.74
SDF4-206ENST00000478938 A0A0A6YYC8 382 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 I3L1I5 382 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 ZNF14P17017 642 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 TYRP1P17643 537 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 GSTM3P21266 225 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 POU3F4P49335 361 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 DNAJB7Q7Z6W7 309 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 CPOQ8IVL8 374 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 OR4A4PQ8NGN8 299 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 VRK1Q99986 396 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 JAM3Q9BX67 310 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 SLC12A9Q9BXP2 914 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 MED20Q9H944 212 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 IL26Q9NPH9 171 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 MEPEQ9NQ76 525 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 HINT3Q9NQE9 182 aaKnown RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 FAM96BQ9Y3D0 163 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 A0A0D9SG52 128 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 J3QRE1 110 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 BCL2L11O43521 198 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 SDHAP31040 664 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 SPAM1P38567 509 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 STXBP1P61764 594 aaKnown RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 ZNF763Q0D2J5 394 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 CLINT1Q14677 625 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 ATXN7L3Q14CW9 347 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 LIPJQ5W064 366 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 OR10H4Q8NGA5 316 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 OR5J2Q8NH18 312 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 SLC25A38Q96DW6 304 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 SEC11CQ9BY50 192 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 AP5M1Q9H0R1 490 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 ALX4Q9H161 411 aaPredicted RBP19.69■□□□□ 0.74
SDF4-206ENST00000478938 ACKR4Q9NPB9 350 aa19.69■□□□□ 0.74
SDF4-206ENST00000478938 FLRT2O43155 660 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 OR4Q2P0C623 313 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 CHAF1BQ13112 559 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 FAM76BQ5HYJ3 339 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 NCMAPQ5T1S8 102 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 KCNRGQ8N5I3 272 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 ZNF614Q8N883 585 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 BBS4Q96RK4 519 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 CHMP1AQ9HD42 196 aaPredicted RBP19.68■□□□□ 0.74
SDF4-206ENST00000478938 DAPL1A0PJW8 107 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 PPIHO43447 177 aaKnown RBP19.68■□□□□ 0.74
SDF4-206ENST00000478938 IGHV2-5P01817 119 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 NUBP1P53384 320 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 TAS2R60P59551 318 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 RAB2AP61019 212 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 OR6T1Q8NGN1 323 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 SNX33Q8WV41 574 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 ACBD6Q9BR61 282 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 UQCC1Q9NVA1 299 aa19.68■□□□□ 0.74
SDF4-206ENST00000478938 H2AFY2Q9P0M6 372 aaPredicted RBP19.68■□□□□ 0.74
SDF4-206ENST00000478938 A0A087WUU8 490 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 ANKRD61A6NGH8 418 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 HOXC4P09017 264 aaPredicted RBP19.67■□□□□ 0.74
SDF4-206ENST00000478938 AGAP20933 346 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 MPIP34949 423 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 HTR5AP47898 357 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 TMEM44Q2T9K0 475 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 LINGO4Q6UY18 593 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 MARS2Q96GW9 593 aaKnown RBP19.67■□□□□ 0.74
SDF4-206ENST00000478938 TMPRSS5Q9H3S3 457 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 SCN8AQ9UQD0 1980 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 C9orf170A2RU37 121 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 IMPA2O14732 288 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 PLPP2O43688 288 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 SLC34A2O95436 690 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 LRRC37A5PQ49AS3 106 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 FAM199XQ6PEV8 388 aaPredicted RBP19.67■□□□□ 0.74
SDF4-206ENST00000478938 ZNF383Q8NA42 475 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 LINC01599Q8WXQ3 324 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 CXorf40BQ96DE9 158 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 PGLYRP3Q96LB9 341 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 EGLN1Q9GZT9 426 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 IL21RQ9HBE5 538 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 ZMIZ1Q9ULJ6 1067 aa19.67■□□□□ 0.74
SDF4-206ENST00000478938 TRAPPC13A5PLN9 417 aa19.66■□□□□ 0.74
SDF4-206ENST00000478938 REM1O75628 298 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms