RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FAM174BQ3ZCQ3 159 aa15.02■□□□□ -0
VIM-204ENST00000478746 ABLIM2Q6H8Q1 611 aa15.02■□□□□ -0
VIM-204ENST00000478746 SLC46A3Q7Z3Q1 461 aa15.02■□□□□ -0
VIM-204ENST00000478746 ANKS4BQ8N8V4 417 aa15.02■□□□□ -0
VIM-204ENST00000478746 SGMS2Q8NHU3 365 aa15.02■□□□□ -0
VIM-204ENST00000478746 FAM120BQ96EK7 910 aaKnown RBP15.02■□□□□ -0
VIM-204ENST00000478746 OCEL1Q9H607 264 aa15.02■□□□□ -0
VIM-204ENST00000478746 ZCCHC3Q9NUD5 404 aaKnown RBP15.02■□□□□ -0
VIM-204ENST00000478746 MALT1Q9UDY8 824 aa15.02■□□□□ -0
VIM-204ENST00000478746 METRNQ9UJH8 293 aa15.02■□□□□ -0
VIM-204ENST00000478746 MOKQ9UQ07 419 aa15.02■□□□□ -0
VIM-204ENST00000478746 AMDHD2Q9Y303 409 aa15.02■□□□□ -0
VIM-204ENST00000478746 ZNF716A6NP11 495 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 ESPNB1AK53 854 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 NPIPB8E9PQR5 432 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 ITGA5P08648 1049 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 EFNA1P20827 205 aaPredicted RBP15.01□□□□□ -0.01
VIM-204ENST00000478746 DCST2Q5T1A1 773 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 C9orf135Q5VTT2 229 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 ZNF572Q7Z3I7 529 aaPredicted RBP15.01□□□□□ -0.01
VIM-204ENST00000478746 OR52E4Q8NGH9 312 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 ADAMTS15Q8TE58 950 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 ZMYND19Q96E35 227 aaPredicted RBP15.01□□□□□ -0.01
VIM-204ENST00000478746 ZHX1-C8orf76Q96EF9 292 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 THUMPD3Q9BV44 507 aaKnown RBP15.01□□□□□ -0.01
VIM-204ENST00000478746 TSPYL1Q9H0U9 437 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 SLC17A5Q9NRA2 495 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 CCL27Q9Y4X3 112 aa15.01□□□□□ -0.01
VIM-204ENST00000478746 MGAM2Q2M2H8 2515 aa15□□□□□ -0.01
VIM-204ENST00000478746 A0A0A6YYJ9 748 aa15□□□□□ -0.01
VIM-204ENST00000478746 SLCO1B7G3V0H7 640 aa15□□□□□ -0.01
VIM-204ENST00000478746 CYP7B1O75881 506 aa15□□□□□ -0.01
VIM-204ENST00000478746 VENTXO95231 258 aa15□□□□□ -0.01
VIM-204ENST00000478746 GSTA1P08263 222 aa15□□□□□ -0.01
VIM-204ENST00000478746 TFPIP10646 304 aa15□□□□□ -0.01
VIM-204ENST00000478746 UBL4AP11441 157 aa15□□□□□ -0.01
VIM-204ENST00000478746 SERPINF1P36955 418 aa15□□□□□ -0.01
VIM-204ENST00000478746 SESN3P58005 492 aa15□□□□□ -0.01
VIM-204ENST00000478746 MERTKQ12866 999 aa15□□□□□ -0.01
VIM-204ENST00000478746 SYT14P1Q58G82 188 aa15□□□□□ -0.01
VIM-204ENST00000478746 TIFABQ6ZNK6 161 aa15□□□□□ -0.01
VIM-204ENST00000478746 LCA5Q86VQ0 697 aa15□□□□□ -0.01
VIM-204ENST00000478746 C17orf78Q8N4C9 275 aa15□□□□□ -0.01
VIM-204ENST00000478746 C3orf56Q8N813 242 aa15□□□□□ -0.01
VIM-204ENST00000478746 LINC01356Q8N9X3 169 aa15□□□□□ -0.01
VIM-204ENST00000478746 ZFAND2BQ8WV99 257 aa15□□□□□ -0.01
VIM-204ENST00000478746 ST8SIA1Q92185 356 aa15□□□□□ -0.01
VIM-204ENST00000478746 TSSK3Q96PN8 268 aa15□□□□□ -0.01
VIM-204ENST00000478746 ACTRT3Q9BYD9 372 aa15□□□□□ -0.01
VIM-204ENST00000478746 C1orf109Q9NX04 203 aa15□□□□□ -0.01
VIM-204ENST00000478746 UPB1Q9UBR1 384 aa15□□□□□ -0.01
VIM-204ENST00000478746 BAIAP2L1Q9UHR4 511 aa15□□□□□ -0.01
VIM-204ENST00000478746 DCTN4Q9UJW0 460 aa15□□□□□ -0.01
VIM-204ENST00000478746 KCNE3Q9Y6H6 103 aa15□□□□□ -0.01
VIM-204ENST00000478746 NPIPB9F8W1W9 429 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 H3BQF6 201 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 SLC28A1O00337 649 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 STAMBPO95630 424 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 PRPH2P23942 346 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 CHN2P52757 468 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 PRPS1P60891 318 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 SLC25A3Q00325 362 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 TGFBR3Q03167 851 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 PDE7AQ13946 482 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 C1QTNF12Q5T7M4 302 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 C1orf162Q8NEQ5 155 aaPredicted RBP14.99□□□□□ -0.01
VIM-204ENST00000478746 CLHC1Q8NHS4 586 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 PIGXQ8TBF5 258 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 SLC25A43Q8WUT9 341 aaPredicted RBP14.99□□□□□ -0.01
VIM-204ENST00000478746 TMEM234Q8WY98 164 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 HPS1Q92902 700 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 CCT7Q99832 543 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 LAT2Q9GZY6 243 aa14.99□□□□□ -0.01
VIM-204ENST00000478746 SIRT3Q9NTG7 399 aaPredicted RBP14.99□□□□□ -0.01
VIM-204ENST00000478746 FAF1Q9UNN5 650 aaPredicted RBP14.99□□□□□ -0.01
VIM-204ENST00000478746 B9A039 149 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 PDLIM1O00151 329 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 ZNF500O60304 480 aaPredicted RBP14.98□□□□□ -0.01
VIM-204ENST00000478746 URI1O94763 535 aaPredicted RBP14.98□□□□□ -0.01
VIM-204ENST00000478746 WNT11O96014 354 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 SDC1P18827 310 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 APEX1P27695 318 aaKnown RBP14.98□□□□□ -0.01
VIM-204ENST00000478746 IL2RGP31785 369 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 CCT3P49368 545 aaKnown RBP14.98□□□□□ -0.01
VIM-204ENST00000478746 ZSWIM7Q19AV6 140 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 CASP12Q6UXS9 341 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 SPATA19Q7Z5L4 167 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 CCDC103Q8IW40 242 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 CCDC126Q96EE4 140 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 KCNS3Q9BQ31 491 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 RAB1BQ9H0U4 201 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 ACER3Q9NUN7 267 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 PARPBPQ9NWS1 579 aa14.98□□□□□ -0.01
VIM-204ENST00000478746 NUP214P35658 2090 aaPredicted RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 A0A087WUV0 522 aaPredicted RBP14.97□□□□□ -0.01
VIM-204ENST00000478746 SERINC4A6NH21 518 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 DNAJA2O60884 412 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 LILRA1O75019 489 aa14.97□□□□□ -0.01
VIM-204ENST00000478746 SNUPNO95149 360 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms