RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TGFBR3Q03167 851 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF117Q03924 483 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SELENBP1Q13228 472 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 PFKFB4Q16877 469 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 C3orf36Q3SXR2 165 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 HIKESHIQ53FT3 197 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC25A53Q5H9E4 307 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF311Q5JNZ3 666 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 DCAF12L2Q5VW00 463 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SAXO2Q658L1 398 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 METTL2BQ6P1Q9 378 aaKnown RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 TMEM107Q6UX40 140 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 C17orf107Q6ZR85 190 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 TMPPEQ6ZT21 453 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 BCL6BQ8N143 479 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 C1orf52Q8N6N3 182 aaKnown RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 KIR3DL3Q8N743 410 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 OR4F15Q8NGB8 312 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 FBXO30Q8TB52 745 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 GPR119Q8TDV5 335 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 CKAP2Q8WWK9 683 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 RDH5Q92781 318 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 YIPF5Q969M3 257 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 UBE2FQ969M7 185 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 LRRC39Q96DD0 335 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ANAPC16Q96DE5 110 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ELP4Q96EB1 424 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 GPR22Q99680 433 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 GPA33Q99795 319 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 TPK1Q9H3S4 243 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF665Q9H7R5 613 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 NMRAL1Q9HBL8 299 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 DYNLRB1Q9NP97 96 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 OBP2BQ9NPH6 170 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 UBQLN4Q9NRR5 601 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC7A10Q9NS82 523 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF275Q9NSD4 429 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 NSMCE4AQ9NXX6 385 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 CRNNQ9UBG3 495 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF69Q9UC07 566 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC22A31A6NKX4 558 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 SYCE1LA8MT33 242 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 VSTM5A8MXK1 200 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GPR171O14626 319 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 DNALI1O14645 258 aaPredicted RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 PPIHO43447 177 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 RP2O75695 350 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 NKX2-2O95096 273 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 PDYNP01213 254 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 JUNP05412 331 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 CECR9P0C854 216 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 PAX7P23759 505 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GATA3P23771 443 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 IVDP26440 423 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 MPGP29372 298 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TYK2P29597 1187 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 NCBP2P52298 156 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 RAE1P78406 368 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 MRPS11P82912 194 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 IFT88Q13099 833 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 HEPACAMQ14CZ8 416 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF362Q5T0B9 420 aaPredicted RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TSPO2Q5TGU0 170 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TTC19Q6DKK2 380 aaPredicted RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GALNT18Q6P9A2 607 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 C16orf87Q6PH81 154 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TMEM139Q8IV31 216 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 PDIK1LQ8N165 341 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 CEP70Q8NHQ1 597 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 RHEBL1Q8TAI7 183 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GPR151Q8TDV0 419 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 ATP6V1E2Q96A05 226 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 ANKRD27Q96NW4 1050 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 OR5B2Q96R09 309 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 ELOVL6Q9H5J4 265 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 BRF2Q9HAW0 419 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GIMAP4Q9NUV9 329 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 DDX18Q9NVP1 670 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 PLEK2Q9NYT0 353 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TAS2R7Q9NYW3 318 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TESQ9UGI8 421 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 GUCA1BQ9UMX6 200 aa6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 TNPO3Q9Y5L0 923 aaKnown RBP6.28□□□□□ -1.4
SPTLC1-205ENST00000477888 CXorf49A8MYA2 514 aaPredicted RBP6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 G3V4G9 280 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 SULT2B1O00204 365 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 SCDO00767 359 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 SYNGR3O43761 229 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 KCNK2O95069 426 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 NUDT14O95848 222 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 TSPAN15O95858 294 aa6.27□□□□□ -1.41
SPTLC1-205ENST00000477888 GFAPP14136 432 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms