RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZNF17P17021 662 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 TACR3P29371 465 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 POLR2HP52434 150 aaKnown RBP14.65□□□□□ -0.06
VHL-203ENST00000477538 CDH12P55289 794 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 FOXK1P85037 733 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 TMEM44Q2T9K0 475 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 POMZP3Q6PJE2 187 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 GDF7Q7Z4P5 450 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 OFCC1Q8IZS5 231 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 OR5M1Q8NGP8 315 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 SLC41A3Q96GZ6 507 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 PIGQQ9BRB3 760 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 DEFB127Q9H1M4 99 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 SLC6A15Q9H2J7 730 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 ACKR4Q9NPB9 350 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 TESMINQ9Y4I5 508 aa14.65□□□□□ -0.06
VHL-203ENST00000477538 PRRC2CQ9Y520 2896 aaKnown RBP14.65□□□□□ -0.06
VHL-203ENST00000477538 OR2M5A3KFT3 312 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ELOA3DA6NLF2 546 aaPredicted RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 NPIPA5E9PKD4 350 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 HNRNPRO43390 633 aaKnown RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 CHP2O43745 196 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 CST1P01037 141 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 THY1P04216 161 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 THRBP10828 461 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ADH6P28332 368 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 APOBEC1P41238 236 aaKnown RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 B3GALT5-AS1P59052 145 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 SPIBQ01892 262 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ST3GAL3Q11203 375 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 FOXD4Q12950 439 aaPredicted RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 ELOA3BQ3SY89 546 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 CMPK2Q5EBM0 449 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 SWT1Q5T5J6 900 aaKnown RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 OR2T5Q6IEZ7 315 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ZNF605Q86T29 641 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ATG4DQ86TL0 474 aaPredicted RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 SIAH3Q8IW03 269 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 CISD2Q8N5K1 135 aaKnown RBP14.64□□□□□ -0.07
VHL-203ENST00000477538 PIK3C3Q8NEB9 887 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 ELOA3Q8NG57 546 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 OR2T29Q8NH02 315 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 SFXN2Q96NB2 322 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 C12orf10Q9HB07 376 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 S100A14Q9HCY8 104 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 OSGIN1Q9UJX0 560 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 NPIPA1Q9UND3 350 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 LIPGQ9Y5X9 500 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 IGSF10Q6WRI0 2623 aa14.64□□□□□ -0.07
VHL-203ENST00000477538 TMED7-TICAM2A0A0A6YYA0 188 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 H3BNX3 289 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 ADAMDEC1O15204 470 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 KRT36O76013 467 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 LYPD3O95274 346 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 H1F0P07305 194 aaKnown RBP14.63□□□□□ -0.07
VHL-203ENST00000477538 PNMTP11086 282 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 FCGR1AP12314 374 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 CXCR1P25024 350 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 ELK4P28324 431 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 RRM2P31350 389 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 GCKP35557 465 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 SELENBP1Q13228 472 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 TRAM2Q15035 370 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 AAGABQ6PD74 315 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 ADGRG3Q86Y34 549 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 NEIL3Q8TAT5 605 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 SLC38A4Q969I6 547 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 DHRS1Q96LJ7 313 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 LDAHQ9H6V9 325 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 EXO5Q9H790 373 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 NMNAT1Q9HAN9 279 aaPredicted RBP14.63□□□□□ -0.07
VHL-203ENST00000477538 SERINC1Q9NRX5 453 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 MAN2C1Q9NTJ4 1040 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 SLC6A5Q9Y345 797 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 TMED7Q9Y3B3 224 aa14.63□□□□□ -0.07
VHL-203ENST00000477538 RRP15Q9Y3B9 282 aaKnown RBP14.63□□□□□ -0.07
VHL-203ENST00000477538 KMT2BQ9UMN6 2715 aaPredicted RBP14.63□□□□□ -0.07
VHL-203ENST00000477538 A0A087WUJ7 227 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 TRGV5A0A0B4J1U4 118 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 SUSD5O60279 629 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 DEAF1O75398 565 aaPredicted RBP14.62□□□□□ -0.07
VHL-203ENST00000477538 GADD45GO95257 159 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 IGHG3P01860 377 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 CCNA2P20248 432 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 IL11P20809 199 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 FUT4P22083 530 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 CHMP24386 653 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 FASP25445 335 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 GFRA1P56159 465 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 SMIM11AP58511 58 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 NFATC3Q12968 1075 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.62□□□□□ -0.07
VHL-203ENST00000477538 PRR30Q53SZ7 412 aaPredicted RBP14.62□□□□□ -0.07
VHL-203ENST00000477538 FGD3Q5JSP0 725 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 C3orf33Q6P1S2 294 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 WDR88Q6ZMY6 472 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 LSRQ86X29 649 aaPredicted RBP14.62□□□□□ -0.07
VHL-203ENST00000477538 NKAIN4Q8IVV8 208 aa14.62□□□□□ -0.07
VHL-203ENST00000477538 LSM14AQ8ND56 463 aaKnown RBP14.62□□□□□ -0.07
VHL-203ENST00000477538 FAR1Q8WVX9 515 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms