RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 BBS10Q8TAM1 723 aa12.61□□□□□ -0.39
SRRT-210ENST00000477529 ANKRD27Q96NW4 1050 aa12.61□□□□□ -0.39
SRRT-210ENST00000477529 CGREF1Q99674 301 aa12.61□□□□□ -0.39
SRRT-210ENST00000477529 RSPO3Q9BXY4 272 aaPredicted RBP12.61□□□□□ -0.39
SRRT-210ENST00000477529 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
SRRT-210ENST00000477529 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
SRRT-210ENST00000477529 ITPR3Q14573 2671 aa12.61□□□□□ -0.39
SRRT-210ENST00000477529 A0A1W2PNR3 127 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 GJE1A6NN92 205 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 EVPLLA8MZ36 301 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 FXYD1O00168 92 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 SYT5O00445 386 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 FAAHO00519 579 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 PGM3O95394 542 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 MTPNP58546 118 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 SIRPAP78324 504 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 CDK6Q00534 326 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 EPS8Q12929 822 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 KLF10Q13118 480 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 NFYCQ13952 458 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 ADRM1Q16186 407 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 TMEM176BQ3YBM2 270 aaPredicted RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 SYT14P1Q58G82 188 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 LUZP2Q86TE4 346 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 ATP6V1C2Q8NEY4 427 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 OSTF1Q92882 214 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 CPNE4Q96A23 557 aaPredicted RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 STARD4Q96DR4 205 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 CTPS2Q9NRF8 586 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 MRGBPQ9NV56 204 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 FOXD3Q9UJU5 478 aaPredicted RBP12.6□□□□□ -0.39
SRRT-210ENST00000477529 ARFGEF3Q5TH69 2177 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 RTTNQ86VV8 2226 aa12.6□□□□□ -0.39
SRRT-210ENST00000477529 CFAP73A6NFT4 308 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 SYNGR4O95473 234 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 PABPC4LP0CB38 370 aaKnown RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 ETS2P15036 469 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 SLC7A1P30825 629 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 APOBEC1P41238 236 aaKnown RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 SCARB2Q14108 478 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 CAPRIN1Q14444 709 aaKnown RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 EEF1A1P5Q5VTE0 462 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 REEP3Q6NUK4 255 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 CLIP4Q8N3C7 705 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 ABHD3Q8WU67 409 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 SLC25A43Q8WUT9 341 aaPredicted RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 C14orf79Q96F83 325 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 LRRC46Q96FV0 321 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 GMPPAQ96IJ6 420 aaPredicted RBP12.59□□□□□ -0.39
SRRT-210ENST00000477529 SLC39A3Q9BRY0 314 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 CHRNA9Q9UGM1 479 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 F8P00451 2351 aa12.59□□□□□ -0.39
SRRT-210ENST00000477529 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.39
SRRT-210ENST00000477529 A8MXE2 369 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 MSTNO14793 375 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
SRRT-210ENST00000477529 SMNDC1O75940 238 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRRT-210ENST00000477529 CGAP01215 116 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 PRG2P13727 222 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 KLK2P20151 261 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 AGTR1P30556 359 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 CPOXP36551 454 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 CPA2P48052 419 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 CARD18P57730 90 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 SORDQ00796 357 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 FAM214BQ7L5A3 538 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
SRRT-210ENST00000477529 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 COMTD1Q86VU5 262 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 ADGRG3Q86Y34 549 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 RBM24Q9BX46 236 aaKnown RBP12.58□□□□□ -0.4
SRRT-210ENST00000477529 OR11A1Q9GZK7 315 aa12.58□□□□□ -0.4
SRRT-210ENST00000477529 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
SRRT-210ENST00000477529 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
SRRT-210ENST00000477529 SERINC1Q9NRX5 453 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms