RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 POLR3FQ9H1D9 316 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-212ENST00000477520 LRRN3Q9H3W5 708 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 OSGEPL1Q9H4B0 414 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 AGO3Q9H9G7 860 aaKnown RBP4.37□□□□□ -1.71
PTCD3-212ENST00000477520 MGAT4CQ9UBM8 478 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 GHRLQ9UBU3 117 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 MRTO4Q9UKD2 239 aaKnown RBP4.37□□□□□ -1.71
PTCD3-212ENST00000477520 NEU3Q9UQ49 428 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 EXO1Q9UQ84 846 aaKnown RBP4.37□□□□□ -1.71
PTCD3-212ENST00000477520 CAMK2AQ9UQM7 478 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 TMED3Q9Y3Q3 217 aa4.37□□□□□ -1.71
PTCD3-212ENST00000477520 PCYT1BQ9Y5K3 369 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-212ENST00000477520 DNAH12Q6ZR08 3092 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 A0A1W2PPC1 479 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 KANTRA0A1W2PQU2 76 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MEX3AA1L020 520 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MARCH11A6NNE9 402 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 COLCA2A8K830 154 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SUPT3HB4E1H0 165 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SEC14L6B5MCN3 397 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 G3V3Q6 166 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 M0QYT0 321 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TLR4O00206 839 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PGRMC2O15173 223 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MID1O15344 667 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 BCAT2O15382 392 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CIDEAO60543 219 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PRKRAO75569 313 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 RAB3DO95716 219 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MT-CO1P00395 513 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 AK1P00568 194 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 VIPP01282 170 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OPN1LWP04000 364 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CD2P06729 351 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 IL3P08700 152 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HOXB5P09067 269 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CLTBP09497 229 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 METTL15P1P0C7V9 234 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 C1GALT1C1LP0DN25 315 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CBSLP0DN79 551 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CLUP10909 449 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HAPLN1P10915 354 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OSMP13725 252 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF14P17017 642 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GOT1P17174 413 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CXCL3P19876 107 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 UQCRC2P22695 453 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PRPH2P23942 346 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 BTCP35070 178 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PCGF2P35227 344 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CBSP35520 551 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 THPOP40225 353 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NNMTP40261 264 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PBX3P40426 434 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GLP1RP43220 463 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CDX1P47902 265 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PPM1FP49593 454 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ANXA11P50995 505 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 AGFG1P52594 562 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PLK1P53350 603 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 CRYBB1P53674 252 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ADPRHP54922 357 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SOX10P56693 466 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NRG3P56975 720 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 VSX2P58304 361 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NUTF2P61970 127 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 BLOC1S1P78537 153 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 DLK1P80370 383 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SLC7A9P82251 487 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MRPS6P82932 125 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GLO1Q04760 184 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ACVR1Q04771 509 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 LAMTOR4Q0VGL1 99 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 FABP9Q0Z7S8 132 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SRSF5Q13243 272 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HTR4Q13639 388 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ARHGEF7Q14155 803 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HEPACAMQ14CZ8 416 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PTGES3Q15185 160 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 P2RY14Q15391 338 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 DHCR24Q15392 516 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 DUOXA1Q1HG43 343 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GXYLT1Q4G148 440 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 IFI44LQ53G44 452 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM31Q5JXX7 168 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SLC35D3Q5M8T2 416 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MARCH8Q5T0T0 291 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM244Q5VVB8 128 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 AFMIDQ63HM1 303 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF626Q68DY1 528 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 C12orf73Q69YU5 71 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 C22orf42Q6IC83 251 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TRNP1Q6NT89 227 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MSANTD2Q6P1R3 559 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ALKAL2Q6UX46 152 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 Q6ZSR9 355 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HIST2H3AQ71DI3 136 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM200AQ86VY9 491 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms