RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DDCP20711 480 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 OMGP23515 440 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 GCH1P30793 250 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 TIA1P31483 386 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMG5-204ENST00000476954 PRKAG1P54619 331 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 CDH13P55290 713 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 PDK3Q15120 406 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 SLC25A53Q5H9E4 307 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 GRTP1Q5TC63 336 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
SMG5-204ENST00000476954 MYPOPQ86VE0 399 aaPredicted RBP13.22□□□□□ -0.29
SMG5-204ENST00000476954 TEX29Q8N6K0 151 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 DVL3Q92997 716 aaPredicted RBP13.22□□□□□ -0.29
SMG5-204ENST00000476954 YIPF5Q969M3 257 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 KATNB1Q9BVA0 655 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 ACPTQ9BZG2 426 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 TRIM31Q9BZY9 425 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 UPB1Q9UBR1 384 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
SMG5-204ENST00000476954 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 TTC36A6NLP5 189 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 PLPP2O43688 288 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 CECR9P0C854 216 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 TCN1P20061 433 aaPredicted RBP13.21□□□□□ -0.29
SMG5-204ENST00000476954 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
SMG5-204ENST00000476954 HTR6P50406 440 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 BTKQ06187 659 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 QPRTQ15274 297 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMG5-204ENST00000476954 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.29
SMG5-204ENST00000476954 ANKRD16Q6P6B7 361 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 GALNT18Q6P9A2 607 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 KLHL24Q6TFL4 600 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 LRIG3Q6UXM1 1119 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 RELL1Q8IUW5 271 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 OR6Y1Q8NGX8 325 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
SMG5-204ENST00000476954 NR5A2O00482 541 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 SKAP2O75563 359 aaPredicted RBP13.2□□□□□ -0.3
SMG5-204ENST00000476954 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
SMG5-204ENST00000476954 MPZL1O95297 269 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 CELA3BP08861 270 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
SMG5-204ENST00000476954 FPR2P25090 351 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 NTSP30990 170 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 ACSM2AQ08AH3 577 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 HSPB3Q12988 150 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 TUSC1Q2TAM9 212 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 ACSM2BQ68CK6 577 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 C3orf33Q6P1S2 294 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 PYROXD1Q8WU10 500 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 MMP27Q9H306 513 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 SLC52A3Q9NQ40 469 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 ZNF275Q9NSD4 429 aaPredicted RBP13.2□□□□□ -0.3
SMG5-204ENST00000476954 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
SMG5-204ENST00000476954 A0A0G2JMP0 313 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 A0A0X1KG70 313 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 GPR171O14626 319 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 KLHL2O95198 593 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 RPS17P08708 135 aaKnown RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 VSIG8P0DPA2 414 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 CCR4P51679 360 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 SUMO3P55854 103 aaPredicted RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 TGFBR3Q03167 851 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 VPS26BQ4G0F5 336 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 KLHL26Q53HC5 615 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 FAM71E1Q6IPT2 247 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 RBMS3Q6XE24 437 aaKnown RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 DOK3Q7L591 496 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 SZRD1Q7Z422 152 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 BCL6BQ8N143 479 aaPredicted RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 TMCO5AQ8N6Q1 288 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 COX18Q8N8Q8 333 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 CDRT4Q8N9R6 151 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 OR4M2Q8NGB6 313 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 ZNF48Q96MX3 618 aaPredicted RBP13.19□□□□□ -0.3
SMG5-204ENST00000476954 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
SMG5-204ENST00000476954 HMX2A2RU54 273 aa13.18□□□□□ -0.3
SMG5-204ENST00000476954 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
SMG5-204ENST00000476954 GTPBP1O00178 669 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms