RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GSPT2Q8IYD1 628 aaKnown RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 KRTCAP2Q8N6L1 136 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 OR5W2Q8NH69 310 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 AGR3Q8TD06 166 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FOXN4Q96NZ1 517 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 STACQ99469 402 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 INPP5KQ9BT40 448 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 SEC61A2Q9H9S3 476 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 CTPS2Q9NRF8 586 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 DUSP22Q9NRW4 184 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ACSS1Q9NUB1 689 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 KCNS2Q9ULS6 477 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 MOKQ9UQ07 419 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 NOSIPQ9Y314 301 aaKnown RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 DTNAQ9Y4J8 743 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ACTL7BQ9Y614 415 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 SULT2B1O00204 365 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 SLC28A1O00337 649 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 KLF11O14901 512 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 SCAMP2O15127 329 aaKnown RBP10.47□□□□□ -0.73
HDAC6-219ENST00000476625 RIPK2O43353 540 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 SKAP2O75563 359 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-219ENST00000476625 CHRNGP07510 517 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 TFPIP10646 304 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
HDAC6-219ENST00000476625 PTAFRP25105 342 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 CCT3P49368 545 aaKnown RBP10.47□□□□□ -0.73
HDAC6-219ENST00000476625 CBFBQ13951 182 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 CR1LQ2VPA4 569 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 ZCCHC12Q6PEW1 402 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 TMPPEQ6ZT21 453 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 ADAMTS15Q8TE58 950 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 PROX1Q92786 737 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 APH1AQ96BI3 265 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 ACTRT3Q9BYD9 372 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 MKLN1Q9UL63 735 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 WBP11Q9Y2W2 641 aaKnown RBP10.47□□□□□ -0.73
HDAC6-219ENST00000476625 PLCE1Q9P212 2302 aa10.47□□□□□ -0.73
HDAC6-219ENST00000476625 IGKV3D-15A0A087WSY6 115 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SERINC4A6NH21 518 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CLDN24A6NM45 220 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 PDLIM1O00151 329 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 AP3D1O14617 1153 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 AZIN1O14977 448 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 PIP5K1BO14986 540 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 PLIN3O60664 434 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 UGT2B17O75795 530 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 RGS9O75916 674 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 URI1O94763 535 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TGFAP01135 160 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CDH2P19022 906 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 LCN1P31025 176 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 RYKP34925 604 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SOAT1P35610 550 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 GZMKP49863 264 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TUBA1BP68363 451 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TUBA4AP68366 448 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 RUNX1T1Q06455 604 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CKAP4Q07065 602 aaKnown RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 MLC1Q15049 377 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SPDYE7PQ495Y7 208 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ATP6AP1LQ52LC2 224 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 HIKESHIQ53FT3 197 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CFAP157Q5JU67 520 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TSPO2Q5TGU0 170 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 KANK2Q63ZY3 851 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CASP12Q6UXS9 341 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TUBA1AQ71U36 451 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 C10orf107Q8IVU9 208 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 DDIASQ8IXT1 998 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 CLECL1Q8IZS7 167 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 TOR1AIP2Q8NFQ8 470 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF764Q96H86 408 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 C3orf30Q96M34 536 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 SDF2Q99470 211 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 GATA5Q9BWX5 397 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-219ENST00000476625 PLA2G12AQ9BZM1 189 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 BPESC1Q9GZL8 116 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 ATP6V1HQ9UI12 483 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 MGAT4BQ9UQ53 548 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 DNAJC15Q9Y5T4 150 aa10.46□□□□□ -0.73
HDAC6-219ENST00000476625 DYSFO75923 2080 aa10.46□□□□□ -0.74
HDAC6-219ENST00000476625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.749e-8■■■□□ 18
HDAC6-219ENST00000476625 H3BNH8 94 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 KCNAB3O43448 404 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 PEX11AO75192 247 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 GLRA3O75311 464 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 SHBGP04278 402 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 PDLIM4P50479 330 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 OR2B6P58173 313 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms