RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 ETFDHQ16134 617 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PGS1Q32NB8 556 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TNFAIP8L3Q5GJ75 292 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ABLIM2Q6H8Q1 611 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TYW3Q6IPR3 259 aaKnown RBP10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 FRRS1Q6ZNA5 592 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 MTDHQ86UE4 582 aaKnown RBP10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 DTX2Q86UW9 622 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 LRRC34Q8IZ02 419 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF433Q8N7K0 673 aaPredicted RBP10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF614Q8N883 585 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF781Q8N8C0 355 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SMAP2Q8WU79 429 aaPredicted RBP10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 FBXW5Q969U6 566 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF300Q96RE9 604 aaPredicted RBP10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PARD6BQ9BYG5 372 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 POTEKPQ9BYX7 375 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 OR51I1Q9H343 314 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 POLE3Q9NRF9 147 aa10.83□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RNF103-CHMP3A0A140T963 221 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF716A6NP11 495 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 C9JVG2 144 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CSTAP01040 98 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 C1QCP02747 245 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SERPINE1P05121 402 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 OR12D1P0DN82 309 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PGCP20142 388 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 UQCRC2P22695 453 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PCSK6P29122 969 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SLC7A1P30825 629 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 APOBEC1P41238 236 aaKnown RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SLC16A1P53985 500 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ABCE1P61221 599 aaKnown RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 H3F3AP84243 136 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 MPP2Q14168 576 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SYT14P1Q58G82 188 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TIMM23BQ5SRD1 257 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 EIF3MQ7L2H7 374 aaKnown RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SSX8Q7RTT4 187 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 GALNT5Q7Z7M9 940 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 P2RY8Q86VZ1 359 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ADGRG3Q86Y34 549 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 MREGQ8N565 214 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RFWD2Q8NHY2 731 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SLC25A43Q8WUT9 341 aaPredicted RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TMEM234Q8WY98 164 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 NEURL3Q96EH8 262 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ARL5BQ96KC2 179 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SLC35G5Q96KT7 338 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 OR5B2Q96R09 309 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TRAF4Q9BUZ4 470 aaPredicted RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SSU72Q9NP77 194 aaKnown RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 NPAP1Q9NZP6 1156 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RAB21Q9UL25 225 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RAP2CQ9Y3L5 183 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 MAGED1Q9Y5V3 778 aaPredicted RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 V9GYY5 206 aaPredicted RBP10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ARFGEF3Q5TH69 2177 aa10.82□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PDLIM1O00151 329 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SULT2B1O00204 365 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 HMGN4O00479 90 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 DNPH1O43598 174 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RAMP1O60894 148 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CRLF1O75462 422 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 LYZL6O75951 148 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SNUPNO95149 360 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PMS2P2O95744 297 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 AGR2O95994 175 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 FESP07332 822 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 UBTFL6P0CB48 400 aaPredicted RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 FKBP2P26885 142 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CLK1P49759 484 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RPL14P50914 215 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CCR4P51679 360 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CASP9P55211 416 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CSNK2A1P68400 391 aaPredicted RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 MERTKQ12866 999 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 PPA1Q15181 289 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CLEC12BQ2HXU8 276 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 KBTBD8Q8NFY9 601 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 XAGE5Q8WWM1 108 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 RAB8BQ92930 207 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ARL8AQ96BM9 186 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 ROPN1LQ96C74 230 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TRMT61AQ96FX7 289 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 TEX37Q96LM6 180 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 REG4Q9BYZ8 158 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SLCO5A1Q9H2Y9 848 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 EXOSC3Q9NQT5 275 aaKnown RBP10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CTPS2Q9NRF8 586 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 SERINC1Q9NRX5 453 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 EXD2Q9NVH0 621 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 CHRNA9Q9UGM1 479 aa10.81□□□□□ -0.68
MSH5-SAPCD1-205ENST00000476085 LIPT1Q9Y234 373 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms