RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	C2orf81	A6NN90	581 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	TMEM150C	B9EJG8	249 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912		C9J4A7	227 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	PSMD11	O00231	422 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	SOCS3	O14543	225 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	GLRA3	O75311	464 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	CTAG2	O75638	210 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	F10	P00742	488 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	IGHE	P01854	428 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	VIM	P08670	466 aa	Known RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	CSNK1D	P48730	415 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	GSC	P56915	257 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	NFE2L1	Q14494	772 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	STK38	Q15208	465 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	NPTX1	Q15818	432 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	INA	Q16352	499 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	MEP1B	Q16820	701 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	TYSND1	Q2T9J0	566 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	PARP15	Q460N3	678 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	MLIP	Q5VWP3	458 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	LRRC66	Q68CR7	880 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	ZNF343	Q6P1L6	599 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	C3P1	Q6ZMU1	363 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912		Q6ZPB1	254 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	GPRIN3	Q6ZVF9	776 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	NUDT13	Q86X67	352 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	MMD2	Q8IY49	270 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	CCDC185	Q8N715	623 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	RTL3	Q8N8U3	475 aa	Known RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	DNAAF3	Q8N9W5	541 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	OR2Y1	Q8NGV0	311 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	OR6S1	Q8NH40	331 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	CA5BP1	Q8WTZ4	195 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	THOC1	Q96FV9	657 aa	Known RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	CELF6	Q96J87	481 aa	Known RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	MCCC1	Q96RQ3	725 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	RIOK2	Q9BVS4	552 aa	Known RBP	3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	LRRC19	Q9H756	370 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912		Q9H8V8	135 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	SLC7A10	Q9NS82	523 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	KCNN3	Q9UGI6	736 aa		3.85	□□□□□ -1.79
PRKD3-208	ENST00000475912	AKAP6	Q13023	2319 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TLN2	Q9Y4G6	2542 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TRAV17	A0A0B4J275	112 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	C5orf52	A6NGY3	159 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PDZK1P1	A8MUH7	402 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912		H3BMH7	237 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CETN3	O15182	167 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	EPHB6	O15197	1021 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	ZNF749	O43361	778 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PALM	O75781	387 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CDK2AP2	O75956	126 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TOX	O94900	526 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	IRF2	P14316	349 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	SYT1	P21579	422 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PRKACG	P22612	351 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	SPAM1	P38567	509 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TNFSF10	P50591	281 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	KPNA2	P52292	529 aa	Known RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CLDN15	P56746	228 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	YBEY	P58557	167 aa	Predicted RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	ARG2	P78540	354 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	MS4A2	Q01362	244 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CALCOCO2	Q13137	446 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	SLMAP	Q14BN4	828 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CDO1	Q16878	200 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	FAM174B	Q3ZCQ3	159 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	LCN1P1	Q5VSP4	162 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	C1orf189	Q5VU69	101 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	RESP18	Q5W5W9	173 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CES4A	Q5XG92	561 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TXNRD3NB	Q6F5E7	133 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	ISLR2	Q6UXK2	745 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	SNX32	Q86XE0	403 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	KLHL7	Q8IXQ5	586 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	UMODL1-AS1	Q8N2C9	162 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	NHLRC2	Q8NBF2	726 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	AGAP11	Q8TF27	550 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PHF10	Q8WUB8	498 aa	Known RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	GTF3A	Q92664	365 aa	Known RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PROX1	Q92786	737 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	CXorf40B	Q96DE9	158 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	RMND5B	Q96G75	393 aa	Predicted RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	PRRG4	Q9BZD6	226 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	UCK2	Q9BZX2	261 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	OR2AG1	Q9H205	316 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	GPATCH2L	Q9NWQ4	482 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	SOHLH2	Q9NX45	425 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TXNDC16	Q9P2K2	825 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	ATXN10	Q9UBB4	475 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TRIM10	Q9UDY6	481 aa		3.84	□□□□□ -1.79
PRKD3-208	ENST00000475912	TG	P01266	2768 aa		3.84	□□□□□ -1.8
PRKD3-208	ENST00000475912	PCM1	Q15154	2024 aa		3.83	□□□□□ -1.8
PRKD3-208	ENST00000475912	SLC9B1P1	A6NJY1	282 aa		3.83	□□□□□ -1.8
PRKD3-208	ENST00000475912	EPM2A	B3EWF7	344 aa		3.83	□□□□□ -1.8
PRKD3-208	ENST00000475912	GOLGA8S	H3BPF8	625 aa		3.83	□□□□□ -1.8
PRKD3-208	ENST00000475912	CHUK	O15111	745 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms