RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 EFHD2Q96C19 240 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PIWIL1Q96J94 861 aaKnown RBP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ALS2CR12Q96Q35 445 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 COPS8Q99627 209 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC77Q9BR77 488 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 LZTS2Q9BRK4 669 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 LRRN3Q9H3W5 708 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SMYD3Q9H7B4 428 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TM9SF3Q9HD45 589 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SLC17A5Q9NRA2 495 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PRODH2Q9UF12 536 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SUN2Q9UH99 717 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 MED14O60244 1454 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ADGRL1O94910 1474 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PLA2R1Q13018 1463 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 IQSEC2Q5JU85 1478 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ABCC10Q5T3U5 1492 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SHANK2Q9UPX8 1470 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 WDR62O43379 1518 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 DISP1Q96F81 1524 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 LRRIQ1Q96JM4 1722 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PIK3R4Q99570 1358 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 FAM135BQ49AJ0 1406 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 HELTA6NFD8 242 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 SAGE2PA6NJ88 616 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 E9PLD3 99 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 SGK1O00141 431 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 EIF3HO15372 352 aaKnown RBP eCLIP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 TAPBPO15533 448 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 FCMRO60667 390 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 GALR3O60755 368 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 GJB5O95377 273 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 F10P00742 488 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 MELTFP08582 738 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ALPIP09923 528 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 BCL3P20749 454 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 GDI1P31150 447 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 EFNB2P52799 333 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 HMGCS2P54868 508 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 VLDLRP98155 873 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CD300CQ08708 224 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF154Q13106 437 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 DYNC1I2Q13409 638 aaKnown RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CYLC2Q14093 348 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 KCNJ11Q14654 390 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 LAGE3Q14657 143 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 PRSS48Q7RTY5 328 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 SLC25A42Q86VD7 318 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 SLC35F2Q8IXU6 374 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF440Q8IYI8 595 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 Q8N377 158 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CSNK1A1LQ8N752 337 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 AKR7LQ8NHP1 331 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF671Q8TAW3 534 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 C17orf50Q8WW18 174 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 NR4A3Q92570 626 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF689Q96CS4 500 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 PELI1Q96FA3 418 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 PPP1R16AQ96I34 528 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CNOT6LQ96LI5 555 aaKnown RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 OR5M11Q96RB7 305 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 BPIFA3Q9BQP9 254 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 SLC35A5Q9BS91 424 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 VCPKMTQ9H867 229 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 MCCC2Q9HCC0 563 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 PNO1Q9NRX1 252 aaKnown RBP3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CUTCQ9NTM9 273 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 COPS3Q9UNS2 423 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 USP16Q9Y5T5 823 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ADGRL2O95490 1459 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ERCC6Q03468 1493 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 ADGBQ8N7X0 1667 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 CDHR2Q9BYE9 1310 aa3.38□□□□□ -1.87
BRCA1-212ENST00000473961 C9orf84Q5VXU9 1444 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ADGRL3Q9HAR2 1447 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 PPRC1Q5VV67 1664 aaKnown RBP3.37□□□□□ -1.87
BRCA1-212ENST00000473961 IGHV2-70DA0A0C4DH43 119 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ACOD1A6NK06 481 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 TMEM110-MUSTN1A8MSY1 372 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 GOLGA8KD6RF30 607 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 E9PQ18 207 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SLC17A2O00624 439 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 RHBDL1O75783 438 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 CLDN9O95484 217 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 TSPAN12O95859 305 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 NDUFB10O96000 172 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 PGK1P00558 417 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 HPP00738 406 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 SERPINA3P01011 423 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 IGHV3-13P01766 116 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 ALOX5P09917 674 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 RANBP1P43487 201 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 XCR1P46094 333 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 OR1D4P47884 311 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 PRELPP51888 382 aa3.37□□□□□ -1.87
BRCA1-212ENST00000473961 GNG11P61952 73 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms