RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 LPGAT1Q92604 370 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TOP1MTQ969P6 601 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PTERQ96BW5 349 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NXNL1Q96CM4 212 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TCEAL4Q96EI5 215 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CABS1Q96KC9 395 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BTN2A3PQ96KV6 586 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF558Q96NG5 402 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RPRD1AQ96P16 312 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC3BQ96PB8 259 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR52B2Q96RD2 323 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 KCNA7Q96RP8 456 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RANBP9Q96S59 729 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ABHD1Q96SE0 405 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CYP2S1Q96SQ9 504 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OMDQ99983 421 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 BTBD10Q9BSF8 475 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LMF2Q9BU23 707 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TRIM62Q9BVG3 475 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FNDC11Q9BVV2 318 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC106Q9BWC9 280 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TSSK1BQ9BXA7 367 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SHCBP1LQ9BZQ2 653 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TM6SF2Q9BZW4 377 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 POLR1EQ9GZS1 481 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 IL22Q9GZX6 179 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DPAGT1Q9H3H5 408 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MFSD1Q9H3U5 465 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 KCNK15Q9H427 330 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO44Q9H4M3 255 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF385DQ9H6B1 395 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 C11orf49Q9H6J7 331 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SUDS3Q9H7L9 328 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TLE6Q9H808 572 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ECT2Q9H8V3 914 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CHRAC1Q9NRG0 131 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 C20orf96Q9NUD7 363 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 COMMD8Q9NX08 183 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NSMCE4AQ9NXX6 385 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SPHK1Q9NYA1 384 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NKIRAS1Q9NYS0 192 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARMCX1Q9P291 453 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 B3GAT1Q9P2W7 334 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GALPQ9UBC7 116 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GIMAP2Q9UG22 337 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DAPK2Q9UIK4 370 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 STOML2Q9UJZ1 356 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RPS6KA6Q9UK32 745 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PLA2G4CQ9UP65 541 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARL2BPQ9Y2Y0 163 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NEUROG3Q9Y4Z2 214 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CPQQ9Y646 472 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ARL5AQ9Y689 179 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 USH1CQ9Y6N9 552 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 POLEQ07864 2286 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DIDO1Q9BTC0 2240 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GTF3C1Q12789 2109 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZGRF1Q86YA3 2104 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MED12LQ86YW9 2145 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PTPRBP23467 1997 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CELSR2Q9HCU4 2923 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CACNA1AO00555 2505 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CHD3Q12873 2000 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TRAV19A0A0A6YYK7 116 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TRBV5-4A0A0C4DH59 114 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 A0A0J9YYE9 177 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ILVBLA1L0T0 632 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TSPAN11A1L157 253 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HEATR9A2RTY3 570 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP73A6NFT4 308 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ENO4A6NNW6 628 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 IQCF5A8MTL0 148 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM114B3SHH9 223 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 C9JVG2 144 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 E9PBE3 544 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 H7C0S8 307 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TRAFD1O14545 582 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 UBFD1O14562 309 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PRRG1O14668 218 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 BIRC5O15392 142 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC7A4O43246 635 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 XRCC3O43542 346 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KDELR3O43731 214 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MGRN1O60291 552 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR10H2O60403 315 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR1I1O60431 355 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KLHL41O60662 606 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TBL1XO60907 577 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KERAO60938 352 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CLDN11O75508 207 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ECI2O75521 394 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ERAL1O75616 437 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF189O75820 626 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 DCTN3O75935 186 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ANXA9O76027 345 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PDE5AO76074 875 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KIAA0754O94854 1291 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KLHL2O95198 593 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms