RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GPR148Q8TDV2 347 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 LMX1AQ8TE12 382 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 C2orf15Q8WU43 125 aaKnown RBP2.02□□□□□ -2.09
CALD1-216ENST00000473714 TMEM37Q8WXS4 190 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 CTNNBL1Q8WYA6 563 aaPredicted RBP2.02□□□□□ -2.09
CALD1-216ENST00000473714 ART4Q93070 314 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 NCLNQ969V3 563 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 TMEM45BQ96B21 275 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 GIMAP5Q96F15 307 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 RBM18Q96H35 190 aaKnown RBP2.02□□□□□ -2.09
CALD1-216ENST00000473714 ZNF479Q96JC4 524 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 LMLNQ96KR4 655 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 ERGIC2Q96RQ1 377 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 S1PR3Q99500 378 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 AGPAT1Q99943 283 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 CBWD1Q9BRT8 395 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 ERP44Q9BS26 406 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 BBS2Q9BXC9 721 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 CALN1Q9BXU9 219 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 DGCR6LQ9BY27 220 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 SHARPINQ9H0F6 387 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 WWP1Q9H0M0 922 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 DPEP3Q9H4B8 488 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 SP140LQ9H930 580 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 PSTPIP2Q9H939 334 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 COG4Q9H9E3 785 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 FBXL12Q9NXK8 326 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 SLC39A1Q9NY26 324 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 BARHL2Q9NY43 387 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 GPR83Q9NYM4 423 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 COX16Q9P0S2 106 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 EIF3KQ9UBQ5 218 aaKnown RBP2.02□□□□□ -2.09
CALD1-216ENST00000473714 IL20RAQ9UHF4 553 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 XPO7Q9UIA9 1087 aaKnown RBP2.02□□□□□ -2.09
CALD1-216ENST00000473714 HPCAL4Q9UM19 191 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 PPP2R2CQ9Y2T4 447 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 MFHAS1Q9Y4C4 1052 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 NUP210LQ5VU65 1888 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 HERC1Q15751 4861 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 FREM1Q5H8C1 2179 aa2.02□□□□□ -2.09
CALD1-216ENST00000473714 YLPM1P49750 1951 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 COL7A1Q02388 2944 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 ROS1P08922 2347 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TENM2Q9NT68 2774 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 A0A087WUV0 522 aaPredicted RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 A0A087WZ39 114 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 C15orf38-AP3S2A0A0A6YYH1 394 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 IGHV4-61A0A0C4DH41 118 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 A0A0J9YVX5 310 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 NKX6-3A6NJ46 265 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 K7ERI5 159 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 ACOT8O14734 319 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 ANGPT2O15123 496 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 SURF4O15260 269 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 MAGEB3O15480 346 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 MLNRO43193 412 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 CHMP2AO43633 222 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 CD5LO43866 347 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 SAP30O75446 220 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 KRT33AO76009 404 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 KIAA0754O94854 1291 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TXNDC12O95881 172 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 IGHV4-59P01825 116 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 UGT2B4P06133 528 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 RPA2P15927 270 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 FUT1P19526 365 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 GPX3P22352 226 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 HNRNPA2B1P22626 353 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 PRDX2P32119 198 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 RPL9P32969 192 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 ID1P41134 155 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 LIMK2P53671 638 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 RAG2P55895 527 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 PEX3P56589 373 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 NANOS2P60321 138 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 HAND2P61296 217 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 SNRPD1P62314 119 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 HERVK_113P63132 956 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 ERVK-8P63133 956 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TFF3Q07654 80 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 RBBP4Q09028 425 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 BNIP1Q12981 228 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 SNTB2Q13425 540 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 NFATC2Q13469 925 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 RFTN1Q14699 578 aaPredicted RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 EXOSC7Q15024 291 aaKnown RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 ZMYND11Q15326 602 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 EXT1Q16394 746 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 CLPPQ16740 277 aaPredicted RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 SGSM1Q2NKQ1 1148 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 KIAA1644Q3SXP7 199 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 SLC36A3Q495N2 470 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 FAM106AQ4KMX7 169 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TMEM41BQ5BJD5 291 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 XKR4Q5GH76 650 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 WDR38Q5JTN6 314 aa2.01□□□□□ -2.09
CALD1-216ENST00000473714 TCHHL1Q5QJ38 904 aaPredicted RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 BEND6Q5SZJ8 279 aaPredicted RBP2.01□□□□□ -2.09
CALD1-216ENST00000473714 LIPJQ5W064 366 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms