RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	MAP3K8	P41279	467 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	CASP4	P49662	377 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	DAP3	P51398	398 aa	Known RBP	3.42	□□□□□ -1.86
BBX-223	ENST00000473542	AIF1	P55008	147 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	TP53I3	Q53FA7	332 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	C1orf220	Q5T0J3	134 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	KCNIP4	Q6PIL6	250 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	CCDC137	Q6PK04	289 aa	Known RBP	3.42	□□□□□ -1.86
BBX-223	ENST00000473542	TMEM123	Q8N131	208 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	BHLHE23	Q8NDY6	225 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	SHC3	Q92529	594 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	IL4I1	Q96RQ9	567 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	RAB34	Q9BZG1	259 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	CHIA	Q9BZP6	476 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	EHD1	Q9H4M9	534 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	RAB18	Q9NP72	206 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	TNFRSF19	Q9NS68	423 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	LCMT1	Q9UIC8	334 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	MOK	Q9UQ07	419 aa		3.42	□□□□□ -1.86
BBX-223	ENST00000473542	CFAP65	Q6ZU64	1925 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	FAM240B	A0A1B0GVZ2	78 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	ZNF208	O43345	1280 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	PRKAB2	O43741	272 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	LGALS2	P05162	132 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	AZU1	P20160	251 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	COX5A	P20674	150 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	NTS	P30990	170 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	EPHX2	P34913	555 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	SSR1	P43307	286 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	CCT3	P49368	545 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	SLC26A2	P50443	739 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	CRYBB1	P53674	252 aa	Predicted RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	FGL1	Q08830	312 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	PMF1	Q6P1K2	205 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	GDPD3	Q7L5L3	318 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	EFL1	Q7Z2Z2	1120 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	UBQLNL	Q8IYU4	475 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	CD177	Q8N6Q3	437 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	OR5D13	Q8NGL4	314 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	OR9A1P	Q8NGU1	263 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	HTR3C	Q8WXA8	447 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	NOL4L	Q96MY1	436 aa	Predicted RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	ZNF184	Q99676	751 aa	Predicted RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	CAPS2	Q9BXY5	557 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	FN3KRP	Q9HA64	309 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	FANCF	Q9NPI8	374 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	TMEM9	Q9P0T7	183 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	PTBP2	Q9UKA9	531 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	CDH9	Q9ULB4	789 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	PRPF19	Q9UMS4	504 aa	Known RBP	3.41	□□□□□ -1.86
BBX-223	ENST00000473542	VSIG4	Q9Y279	399 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	TIMM10B	Q9Y5J6	103 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	ATP10A	O60312	1499 aa		3.41	□□□□□ -1.86
BBX-223	ENST00000473542	TRDC	B7Z8K6	153 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	MPHOSPH10	O00566	681 aa	Known RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	OR10H3	O60404	316 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	SLITRK3	O94933	977 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	LYPD3	O95274	346 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	IL1B	P01584	269 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	RPS2	P15880	293 aa	Known RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	VDAC1	P21796	283 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	HOXD10	P28358	340 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	RPL13A	P40429	203 aa	Known RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	HSPA2	P54652	639 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	RPL23A	P62750	156 aa	Known RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	IGLV3-21	P80748	117 aa	Predicted RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	TNFRSF17	Q02223	184 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	EGFEM1P	Q0D2K5	195 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	KLRB1	Q12918	225 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	TRIM16L	Q309B1	348 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	FILIP1L	Q4L180	1135 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	TPGS2	Q68CL5	300 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	OR4F3	Q6IEY1	312 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	ZSCAN25	Q6NSZ9	544 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	TRPM8	Q7Z2W7	1104 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	ZNF677	Q86XU0	584 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	SLC35F2	Q8IXU6	374 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	ZBED8	Q8IZ13	594 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	CATSPER1	Q8NEC5	780 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	OR13C2	Q8NGS9	318 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	ZPLD1	Q8TCW7	415 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	SLC25A38	Q96DW6	304 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	MS4A14	Q96JA4	679 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	SERAC1	Q96JX3	654 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	RPRD1A	Q96P16	312 aa	Predicted RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	RBM14	Q96PK6	669 aa	Known RBP	3.4	□□□□□ -1.87
BBX-223	ENST00000473542	SMIM14	Q96QK8	99 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	NPAS2	Q99743	824 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	CLEC4A	Q9UMR7	237 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	ASB3	Q9Y575	518 aa		3.4	□□□□□ -1.87
BBX-223	ENST00000473542	NOTCH2	Q04721	2471 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	RPAP1	Q9BWH6	1393 aa	Predicted RBP	3.39	□□□□□ -1.87
BBX-223	ENST00000473542	KLF18	A0A0U1RQI7	1052 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542		A0A0U1RQS6	177 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	EPOP	A6NHQ4	379 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	TNFSF11	O14788	317 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	HCRTR1	O43613	425 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	AP2A1	O95782	977 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	ALOX5	P09917	674 aa		3.39	□□□□□ -1.87
BBX-223	ENST00000473542	LEP	P41159	167 aa		3.39	□□□□□ -1.87

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