RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NANOGQ9H9S0 305 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 CACYBPQ9HB71 228 aaKnown RBP16.22■□□□□ 0.19
SNX4-204ENST00000473417 RLIMQ9NVW2 624 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 AP4B1Q9Y6B7 739 aa16.22■□□□□ 0.19
SNX4-204ENST00000473417 ABCA4P78363 2273 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 C7orf72A4D263 438 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 TNFSF13O75888 250 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 PRKCAP17252 672 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 IL11P20809 199 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 SLC6A2P23975 617 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 PSMA4P25789 261 aaKnown RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 EIF1P41567 113 aaKnown RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 IST1P53990 364 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 CLDN20P56880 219 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 LIN52Q52LA3 116 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 RABL3Q5HYI8 236 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 PRAMEF8Q5VWM4 474 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 PRAMEF7Q5VXH5 474 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 REEP3Q6NUK4 255 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 MEIOBQ8N635 442 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 METTL25Q8N6Q8 603 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 OR10A6Q8NH74 314 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 CCT8L2Q96SF2 557 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 LIME1Q9H400 295 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 PIF1Q9H611 641 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 TMEM185BQ9H7F4 350 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 KAT8Q9H7Z6 458 aaKnown RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 GID8Q9NWU2 228 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 ST6GALNAC2Q9UJ37 374 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 ZNF232Q9UNY5 417 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 ZNF443Q9Y2A4 671 aaPredicted RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 ARL2BPQ9Y2Y0 163 aa16.21■□□□□ 0.19
SNX4-204ENST00000473417 GPC6Q9Y625 555 aaPredicted RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 ZNF469Q96JG9 3925 aaPredicted RBP16.21■□□□□ 0.19
SNX4-204ENST00000473417 AIM2O14862 343 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 DNAJA2O60884 412 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 ADAM11O75078 769 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 TGM6O95932 706 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 NPPAP01160 153 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 EPXP11678 715 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 PGCP20142 388 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 AQP1P29972 269 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 CLDN15P56746 228 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 LARS2Q15031 903 aaKnown RBP16.2■□□□□ 0.18
SNX4-204ENST00000473417 ZNF311Q5JNZ3 666 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 CHMP1BQ7LBR1 199 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 LUZP2Q86TE4 346 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 CDC20BQ86Y33 519 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 PTOV1Q86YD1 416 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 CLIP4Q8N3C7 705 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 C11orf65Q8NCR3 313 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 ZNF563Q8TA94 476 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 SH3GL1Q99961 368 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 RBM24Q9BX46 236 aaKnown RBP16.2■□□□□ 0.18
SNX4-204ENST00000473417 PIGMQ9H3S5 423 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 EXOSC3Q9NQT5 275 aaKnown RBP16.2■□□□□ 0.18
SNX4-204ENST00000473417 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 IFT52Q9Y366 437 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
SNX4-204ENST00000473417 A0A1W2PNV4 684 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 CDHR4A6H8M9 788 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 EIF1AYO14602 144 aaKnown RBP16.19■□□□□ 0.18
SNX4-204ENST00000473417 AP3D1O14617 1153 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 EFNA2O43921 213 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 THBS1P07996 1170 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 PABPC4LP0CB38 370 aaKnown RBP16.19■□□□□ 0.18
SNX4-204ENST00000473417 ETS2P15036 469 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 ADH6P28332 368 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 SESN3P58005 492 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 RAC1P63000 192 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 EEF1A1P68104 462 aaKnown RBP16.19■□□□□ 0.18
SNX4-204ENST00000473417 EEF1A1P5Q5VTE0 462 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 SERPINA11Q86U17 422 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 HIPK4Q8NE63 616 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 ATP6V1C2Q8NEY4 427 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 OR8J3Q8NGG0 315 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 TMEM234Q8WY98 164 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 MRGPRX4Q96LA9 322 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 ECSITQ9BQ95 431 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 CXXC4Q9H2H0 198 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 STOML1Q9UBI4 398 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 ADAM21Q9UKJ8 722 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 PACSIN3Q9UKS6 424 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 ANGPT4Q9Y264 503 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 CHST2Q9Y4C5 530 aa16.19■□□□□ 0.18
SNX4-204ENST00000473417 VPS13CQ709C8 3753 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 SLC22A20A6NK97 555 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 GOSR1O95249 250 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 NTN1O95631 604 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 CRHP06850 196 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 GKN3PP0CG01 181 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 ME2P23368 584 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 SFTPDP35247 375 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 SLC6A8P48029 635 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 CPA2P48052 419 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 IDH2P48735 452 aaKnown RBP16.18■□□□□ 0.18
SNX4-204ENST00000473417 GZMMP51124 257 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 EEFSECP57772 596 aaKnown RBP16.18■□□□□ 0.18
SNX4-204ENST00000473417 RBBP4Q09028 425 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms