RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 LRRC25Q8N386 305 aaPredicted RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 RFLNBQ8N5W9 214 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 SDF2Q99470 211 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 ZDHHC4Q9NPG8 344 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 NPIPA5A0A0B4J1W7 369 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 NPIPA7E9PJI5 369 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 CTDSPLO15194 276 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 TFP02787 698 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 NPIPA8P0DM63 369 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 NT5EP21589 574 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 NDUFS1P28331 727 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 CAPZA2P47755 286 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR4N5Q8IXE1 308 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 HDDC3Q8N4P3 179 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR2T4Q8NH00 348 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 LRRC3BQ96PB8 259 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 ALDOBP05062 364 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 PSMB1P20618 241 aaKnown RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 C4BPBP20851 252 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 ARL14Q8N4G2 192 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR2L3Q8NG85 312 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR52E1Q8NGJ3 308 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 GCDHQ92947 438 aaPredicted RBP13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 ARSGQ96EG1 525 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 MGAT4CQ9UBM8 478 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 POMT2Q9UKY4 750 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
NHLRC3-204ENST00000473371 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 TSPAN4O14817 238 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 PRAF2O60831 178 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 PCDH8O95206 1070 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ADH1CP00326 375 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 THBS1P07996 1170 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 SLC2A5P22732 501 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 DGLUCYQ7Z3D6 616 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 UBE2Q1Q7Z7E8 422 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 GPAT4Q86UL3 456 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 TBC1D3EA0A087X179 549 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 TGM6O95932 706 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ZNF234Q14588 700 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 CDK5R1Q15078 307 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 MFSD9Q8NBP5 474 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 KCT2Q8NC54 265 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 FAM98AQ8NCA5 519 aaKnown RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ZCCHC4Q9H5U6 513 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 SPHK1Q9NYA1 384 aa13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 AKAP7Q9P0M2 348 aaPredicted RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
NHLRC3-204ENST00000473371 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 C1QTNF3-AMACRE9PGA6 284 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 DBIP07108 87 aaKnown RBP13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 ADRB1P08588 477 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 TSFMP43897 325 aaKnown RBP13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 HES5Q5TA89 166 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 SFTPA1Q8IWL2 248 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 ZNF619Q8N2I2 560 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 GRHL3Q8TE85 626 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 SMIM19Q96E16 107 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 SFXN2Q96NB2 322 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 DERL3Q96Q80 235 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 SEC22CQ9BRL7 303 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 PPA2Q9H2U2 334 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 MBNL1Q9NR56 388 aaKnown RBP13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 PLEKHM1Q9Y4G2 1056 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 hCG_1807616A0A1W2PRN6 198 aa13.15□□□□□ -0.3
NHLRC3-204ENST00000473371 OGG1O15527 345 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms