RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 SLC7A7Q9UM01 511 aa11.37□□□□□ -0.59
TRAPPC12-217ENST00000473348 RPH3AQ9Y2J0 694 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-217ENST00000473348 ARHGAP21Q5T5U3 1957 aa11.37□□□□□ -0.59
TRAPPC12-217ENST00000473348 SPTA1P02549 2419 aa11.37□□□□□ -0.59
TRAPPC12-217ENST00000473348 ELOA3DA6NLF2 546 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 H0Y3Z8 333 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ADAMDEC1O15204 470 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ZIC3O60481 467 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 DEAF1O75398 565 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 LYPD3O95274 346 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 WISP1O95388 367 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 NTN1O95631 604 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 LDLRP01130 860 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 H1F0P07305 194 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 THRBP10828 461 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ZNF17P17021 662 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 FUT4P22083 530 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 FASP25445 335 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 EIF1P41567 113 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 HTR3AP46098 478 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 POLR2HP52434 150 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 FOXK1P85037 733 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ALDH6A1Q02252 535 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 KLRB1Q12918 225 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 TRAM2Q15035 370 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 RCN1Q15293 331 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ATP6AP1Q15904 470 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 TMEM44Q2T9K0 475 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ELOA3BQ3SY89 546 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 FGD3Q5JSP0 725 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 WIPI1Q5MNZ9 446 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ATG4DQ86TL0 474 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 GTPBP8Q8N3Z3 284 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ELOA3Q8NG57 546 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 OR5M1Q8NGP8 315 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 LRTOMTQ8WZ04 291 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 DHRS1Q96LJ7 313 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ADAM19Q9H013 955 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 TSPAN10Q9H1Z9 355 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 SLC6A15Q9H2J7 730 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ZDHHC11Q9H8X9 412 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 REEP1Q9H902 201 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 NMNAT1Q9HAN9 279 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 MAN2C1Q9NTJ4 1040 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 VNN3Q9NY84 501 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 MRPS18CQ9Y3D5 142 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 KMT2BQ9UMN6 2715 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-217ENST00000473348 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 OR2M5A3KFT3 312 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 GNGT2O14610 69 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 CLOCKO15516 846 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 GADD45GO95257 159 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 CRYABP02511 175 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 PNMTP11086 282 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 CCNA2P20248 432 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 PTNP21246 168 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 CXCR1P25024 350 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 ELK4P28324 431 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 ADH6P28332 368 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 APOBEC1P41238 236 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 SMIM11AP58511 58 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 B3GALT5-AS1P59052 145 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 GLYR1Q49A26 553 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 HMBOX1Q6NT76 420 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 WDR88Q6ZMY6 472 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 AMIGO2Q86SJ2 522 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 NKAIN4Q8IVV8 208 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 LILRA2Q8N149 483 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 OR52J3Q8NH60 311 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 SLC38A4Q969I6 547 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 WBP1Q96G27 269 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 SFXN2Q96NB2 322 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 UBL7Q96S82 380 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 PKP2Q99959 881 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 PRSS27Q9BQR3 290 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 PIGQQ9BRB3 760 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 DEFB127Q9H1M4 99 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 DNAJB9Q9UBS3 223 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 SAMHD1Q9Y3Z3 626 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 LIPGQ9Y5X9 500 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 LYVE1Q9Y5Y7 322 aa11.35□□□□□ -0.59
TRAPPC12-217ENST00000473348 A0A087WUJ7 227 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 A0A1W2PRQ8 180 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 H3BML4 177 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 TNFRSF11BO00300 401 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 SUSD5O60279 629 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 E2F6O75461 281 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 BAG2O95816 211 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 IL11P20809 199 aa11.34□□□□□ -0.59
TRAPPC12-217ENST00000473348 PPP1R8Q12972 351 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms