RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 MRGPRGQ86SM5 289 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 GGNQ86UU5 652 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 MARVELD2Q8N4S9 558 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 OR10Q1Q8NGQ4 319 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 MBD3L2Q8NHZ7 208 aaPredicted RBP13.61□□□□□ -0.23
SNX13-205ENST00000471744 WNT2BQ93097 391 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 NPAS1Q99742 590 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 ALG2Q9H553 416 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 TIGARQ9NQ88 270 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 TESQ9UGI8 421 aaKnown RBP13.61□□□□□ -0.23
SNX13-205ENST00000471744 CHRNA9Q9UGM1 479 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 ZNF175Q9Y473 711 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 CHST2Q9Y4C5 530 aa13.61□□□□□ -0.23
SNX13-205ENST00000471744 NME4O00746 187 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 EIF1AYO14602 144 aaKnown RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 AP3D1O14617 1153 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 ADAM11O75078 769 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 GKN3PP0CG01 181 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 FCGR2AP12318 317 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 SLC7A1P30825 629 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 CLK1P49759 484 aaKnown RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 SUCLG1P53597 346 aaKnown RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 CLDN15P56746 228 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 RGS8P57771 180 aaPredicted RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 NCALDP61601 193 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 MXRA7P84157 204 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 DMTNQ08495 405 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 SGCBQ16585 318 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 TENM4Q6N022 2769 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 RPRMLQ8N4K4 120 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 ITLN2Q8WWU7 325 aaPredicted RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 TMEM185BQ9H7F4 350 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 CLCF1Q9UBD9 225 aa13.6□□□□□ -0.23
SNX13-205ENST00000471744 USP9YO00507 2555 aaPredicted RBP13.6□□□□□ -0.23
SNX13-205ENST00000471744 SLC22A20A6NK97 555 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 GSTA4O15217 222 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 EFNA2O43921 213 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 GCM2O75603 506 aaPredicted RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 LGI1O95970 557 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 CALB2P22676 271 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 CHRNB4P30926 498 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 CEACAM8P31997 349 aaPredicted RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 SFTPDP35247 375 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 EIF1AXP47813 144 aaKnown RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 KCNJ5P48544 419 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 TMEM176BQ3YBM2 270 aaPredicted RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 SPATS1Q496A3 300 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 EEF1A1P5Q5VTE0 462 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 OR2A2Q6IF42 318 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 TRPM8Q7Z2W7 1104 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 P4HA3Q7Z4N8 544 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 RANBP3LQ86VV4 465 aaPredicted RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 SMYD1Q8NB12 490 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 OR10D3Q8NH80 312 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 TAMM41Q96BW9 452 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 ZNF524Q96C55 264 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 SDCCAG3Q96C92 435 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 ADGRG7Q96K78 797 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 KCTD14Q9BQ13 255 aaPredicted RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 ZNF559Q9BR84 538 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 TRIM2Q9C040 744 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 ADAM19Q9H013 955 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 CTPS2Q9NRF8 586 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 ADA2Q9NZK5 511 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 RPS6KB2Q9UBS0 482 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 BAG5Q9UL15 447 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 MCTS1Q9ULC4 181 aaKnown RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 SLC9A8Q9Y2E8 581 aa13.59□□□□□ -0.23
SNX13-205ENST00000471744 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
SNX13-205ENST00000471744 TMED7-TICAM2A0A0A6YYA0 188 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 A0A0J9YW62 118 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 TNFSF11O14788 317 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 ZNF208O43345 1280 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 TPST1O60507 370 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 FMO6PO60774 539 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 SYNGR4O95473 234 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 OPN1SWP03999 348 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 IL11P20809 199 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 CXCR1P25024 350 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 TACR3P29371 465 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 KDELR2P33947 212 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 GSK3BP49841 420 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 CARD18P57730 90 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 NRF1Q16656 503 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 DUSP7Q16829 419 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 SYT14P1Q58G82 188 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 SAMD4BQ5PRF9 694 aaKnown RBP13.58□□□□□ -0.24
SNX13-205ENST00000471744 POMZP3Q6PJE2 187 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 CADM2Q8N3J6 435 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 LSMEM1Q8N8F7 131 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 ATP6V1C2Q8NEY4 427 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 CA5BP1Q8WTZ4 195 aa13.58□□□□□ -0.24
SNX13-205ENST00000471744 DNAJA4Q8WW22 397 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms