RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SLC27A4Q6P1M0 643 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ALDH16A1Q8IZ83 802 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ADAMTS17Q8TE56 1095 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 DNAJA4Q8WW22 397 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 CRB3Q9BUF7 120 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 POLDIP3Q9BY77 421 aaKnown RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 RSL24D1Q9UHA3 163 aaKnown RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 A0A1B0GWA3 101 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 EFCAB10A6NFE3 127 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 ARGFXA6NJG6 315 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 RNF144AP50876 292 aaPredicted RBP16■□□□□ 0.15
HSPG2-208ENST00000471322 NR0B1P51843 470 aaKnown RBP16■□□□□ 0.15
HSPG2-208ENST00000471322 PNLIPRP2P54317 469 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 CTBP2P56545 445 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 TMEM201Q5SNT2 666 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 HSDL2Q6YN16 418 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF441Q8N8Z8 693 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 FAM71CQ8NEG0 241 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF420Q8TAQ5 688 aaPredicted RBP16■□□□□ 0.15
HSPG2-208ENST00000471322 RNF217Q8TC41 542 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 TTC9Q92623 222 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 SGCDQ92629 289 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 SLC38A2Q96QD8 506 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 LPAR4Q99677 370 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 ARHGAP9Q9BRR9 750 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 COPS4Q9BT78 406 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 YIPF3Q9GZM5 350 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 FKBP14Q9NWM8 211 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 IL20Q9NYY1 176 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 CNOT2Q9NZN8 540 aaKnown RBP16■□□□□ 0.15
HSPG2-208ENST00000471322 CNIH4Q9P003 139 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF223Q9UK11 482 aaPredicted RBP16■□□□□ 0.15
HSPG2-208ENST00000471322 POLHQ9Y253 713 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 NUP210LQ5VU65 1888 aa16■□□□□ 0.15
HSPG2-208ENST00000471322 HTR3EA5X5Y0 456 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 GTPBP1O00178 669 aaKnown RBP15.99■□□□□ 0.15
HSPG2-208ENST00000471322 TSPAN2O60636 221 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 SEC14L2O76054 403 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 IGFBP1P08833 259 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-208ENST00000471322 UBL4AP11441 157 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PCYT1AP49585 367 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 SH3BGRP55822 239 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-208ENST00000471322 NRG3P56975 720 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PIGFQ07326 219 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PLCXD2Q0VAA5 305 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 LY6DQ14210 128 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 SSPNQ14714 243 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 OCLNQ16625 522 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 LINC00303Q3SY05 128 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 FNDC7Q5VTL7 733 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 MEDAGQ5VYS4 303 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 RPL13AP3Q6NVV1 102 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PCSK4Q6UW60 755 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 TMEM205Q6UW68 189 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 TMPRSS11FQ6ZWK6 438 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 CPEB2Q7Z5Q1 589 aaKnown RBP15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PPP1R32Q7Z5V6 425 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 MRGPREQ86SM8 312 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 KIF18BQ86Y91 864 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 FAM26EQ8N5C1 309 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 NFAM1Q8NET5 270 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-208ENST00000471322 OR13F1Q8NGS4 319 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 OR8K3Q8NH51 312 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 MUL1Q969V5 352 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 C8orf44Q96CB5 159 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 VMP1Q96GC9 406 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 ADOQ96SZ5 270 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 FLRT3Q9NZU0 649 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 KCNMB2Q9Y691 235 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 CDH10Q9Y6N8 788 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 COMMD3-BMI1R4GMX3 469 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 PCSK5Q92824 1860 aa15.99■□□□□ 0.15
HSPG2-208ENST00000471322 A0A1W2PQD3 144 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 UNC119BA6NIH7 251 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 CD63P08962 238 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 PCMT1P22061 227 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 RNF4P78317 190 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 EMX1Q04741 257 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-208ENST00000471322 CRTC2Q53ET0 693 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-208ENST00000471322 ALG10BQ5I7T1 473 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 AHSA2Q719I0 299 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 AMER2Q8N7J2 671 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 POGLUT1Q8NBL1 392 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 OR5L2Q8NGL0 311 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 NUBPLQ8TB37 319 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 GRHL3Q8TE85 626 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 RORBQ92753 470 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 GGHQ92820 318 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 BBC3Q96PG8 261 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-208ENST00000471322 LMF1Q96S06 567 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF426Q9BUY5 554 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 TVP23BQ9NYZ1 205 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 TLN1Q9Y490 2541 aaKnown RBP15.98■□□□□ 0.15
HSPG2-208ENST00000471322 MED13Q9UHV7 2174 aa15.98■□□□□ 0.15
HSPG2-208ENST00000471322 SNTNA6NMZ2 147 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF264O43296 627 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ITGB2P05107 769 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 HMGN1P05114 100 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 GPR4P46093 362 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms