RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SMAD9O15198 467 aaKnown RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 PHF1O43189 567 aaPredicted RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 GPRIN2O60269 458 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 CYP7B1O75881 506 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 SLC25A16P16260 332 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 IGHV1-2P23083 117 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 TTKP33981 857 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 TIGD2Q4W5G0 525 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 OR7A2PQ8NGA2 310 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 ZHX1-C8orf76Q96EF9 292 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 PPP3R2Q96LZ3 170 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF300Q96RE9 604 aaPredicted RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 TNFRSF13CQ96RJ3 184 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 PRPF18Q99633 342 aaKnown RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 DHRS9Q9BPW9 319 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 AMBRA1Q9C0C7 1298 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 CENPHQ9H3R5 247 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 LPAR3Q9UBY5 353 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 DNAJC15Q9Y5T4 150 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 SPIN1Q9Y657 262 aaPredicted RBP12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 SULT2B1O00204 365 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 CFLARO15519 480 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 RAD51DO75771 328 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 PGM3O95394 542 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 SERPINE1P05121 402 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 CHRNGP07510 517 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 BMP4P12644 408 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 H2AFXP16104 143 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 PGCP20142 388 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 COX5AP20674 150 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 PTAFRP25105 342 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 SOAT1P35610 550 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 FABP6P51161 128 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 CASP9P55211 416 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 IRX1P78414 480 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 MPP2Q14168 576 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 MUC15Q8N387 334 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF433Q8N7K0 673 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 OR10H5Q8NGA6 315 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 OR52N5Q8NH56 324 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 SFXN5Q8TD22 340 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 SLC25A43Q8WUT9 341 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 TWIST2Q8WVJ9 160 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 TMEM234Q8WY98 164 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 ST8SIA1Q92185 356 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 APH1AQ96BI3 265 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 THUMPD3Q9BV44 507 aaKnown RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 TUBB1Q9H4B7 451 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 VIPAS39Q9H9C1 493 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
SEMA3F-208ENST00000470737 YLPM1P49750 1951 aaKnown RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 GOLGA8QA0A0J9YX86 632 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 GOLGA8OA6NCC3 632 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 SERINC4A6NH21 518 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ELOA3DA6NLF2 546 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 DUXAA6NLW8 204 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 E7EQL1 145 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 GOLGA8NF8WBI6 632 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 LYPLA1O75608 230 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 H6PDO95479 791 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 C6orf47O95873 294 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 F12P00748 615 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 TFPIP10646 304 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 LAMP1P11279 417 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ARRB2P32121 409 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 DIO1P49895 249 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF83P51522 516 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 VLDLRP98155 873 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 CHRNEQ04844 493 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 MERTKQ12866 999 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 GPR68Q15743 365 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ELOA3BQ3SY89 546 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ATP6AP1LQ52LC2 224 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 PDZK1Q5T2W1 519 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 ELOA3Q8NG57 546 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 FAM168AQ92567 244 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 OR7D2Q96RA2 312 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 LAT2Q9GZY6 243 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 QRSL1Q9H0R6 528 aaKnown RBP12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 KCNK9Q9NPC2 374 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 GPATCH2Q9NW75 528 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 KCNE3Q9Y6H6 103 aa12.23□□□□□ -0.45
SEMA3F-208ENST00000470737 NPIPB9F8W1W9 429 aa12.22□□□□□ -0.45
SEMA3F-208ENST00000470737 M0R1B8 84 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms