RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 KLF8O95600 359 aaPredicted RBP3.33□□□□□ -1.88
SSB-209ENST00000470621 COX7A1P24310 79 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 CCNCP24863 283 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 TMEM41BQ5BJD5 291 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 GPRC6AQ5T6X5 926 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 C1orf146Q5VVC0 180 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 ATL3Q6DD88 541 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 TPRA1Q86W33 373 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 Q8N9W7 124 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 RPL3LQ92901 407 aaKnown RBP3.33□□□□□ -1.88
SSB-209ENST00000470621 CHRDL1Q9BU40 450 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 SPATA16Q9BXB7 569 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 NAT10Q9H0A0 1025 aaKnown RBP3.33□□□□□ -1.88
SSB-209ENST00000470621 SIGLEC8Q9NYZ4 499 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 MTRF1LQ9UGC7 380 aaKnown RBP3.33□□□□□ -1.88
SSB-209ENST00000470621 ATP10DQ9P241 1426 aa3.33□□□□□ -1.88
SSB-209ENST00000470621 IGLV3-16A0A075B6K0 115 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 GJE1A6NN92 205 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 FAM166BA8MTA8 275 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 HCRTR1O43613 425 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 OR1F1O43749 312 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 FAM189A1O60320 539 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 OR10H3O60404 316 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 DIRAS3O95661 229 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 AK1P00568 194 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 CALCBP10092 127 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 PSMA2P25787 234 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 KLK7P49862 253 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 PLK1P53350 603 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 PLA2G16P53816 162 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 SCGB2A2Q13296 93 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 GPNMBQ14956 572 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 RABGAP1LQ5R372 815 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 CCDC137Q6PK04 289 aaKnown RBP3.32□□□□□ -1.88
SSB-209ENST00000470621 ACP7Q6ZNF0 438 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 ACOT7LQ6ZUV0 252 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 LRRC43Q8N309 656 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 BLOC1S5Q8TDH9 187 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 RAPGEF5Q92565 580 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 TSG101Q99816 390 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 NXF5Q9H1B4 397 aaKnown RBP3.32□□□□□ -1.88
SSB-209ENST00000470621 ZNF223Q9UK11 482 aaPredicted RBP3.32□□□□□ -1.88
SSB-209ENST00000470621 ERVW-1Q9UQF0 538 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 SLCO1B1Q9Y6L6 691 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 U3KQV3 271 aa3.32□□□□□ -1.88
SSB-209ENST00000470621 ATP8B3O60423 1300 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 IGHV3OR16-13A0A075B7E8 117 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 ANKRD63C9JTQ0 380 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 ZSCAN12O43309 604 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 UGT2B17O75795 530 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 UFL1O94874 794 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 MOSP00540 346 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 MMP1P03956 469 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 NT5EP21589 574 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 PJVKQ0ZLH3 352 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 MXD4Q14582 209 aaPredicted RBP3.31□□□□□ -1.88
SSB-209ENST00000470621 CDC37Q16543 378 aaPredicted RBP3.31□□□□□ -1.88
SSB-209ENST00000470621 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 CENPLQ8N0S6 344 aaPredicted RBP3.31□□□□□ -1.88
SSB-209ENST00000470621 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 MARCH1Q8TCQ1 289 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 UCN3Q969E3 161 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 DPH5Q9H2P9 285 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 RAB26Q9ULW5 256 aa3.31□□□□□ -1.88
SSB-209ENST00000470621 IGKV1D-8A0A087WSZ0 117 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 GSAPA4D1B5 854 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 HELTA6NFD8 242 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 LGI1O95970 557 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 ATP6V1B2P21281 511 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 PRDX3P30048 256 aaKnown RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 LHX2P50458 406 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 MAP2K1Q02750 393 aaPredicted RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 TGFBR3Q03167 851 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 CCDC57Q2TAC2 916 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 NSUN5P1Q3KNT7 163 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 GGTA1PQ4G0N0 100 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 KLF17Q5JT82 389 aaPredicted RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 ZNF786Q8N393 782 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 FADS6Q8N9I5 356 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 CATSPER1Q8NEC5 780 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 FAM3CQ92520 227 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 OSTF1Q92882 214 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 RASL11BQ9BPW5 248 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 ZNF416Q9BWM5 594 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 RWDD1Q9H446 243 aaPredicted RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 PATZ1Q9HBE1 687 aaKnown RBP3.3□□□□□ -1.88
SSB-209ENST00000470621 AIPL1Q9NZN9 384 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 TP53TG5Q9Y2B4 290 aa3.3□□□□□ -1.88
SSB-209ENST00000470621 SF3B1O75533 1304 aaKnown RBP eCLIP3.29□□□□□ -1.88
SSB-209ENST00000470621 A0A0G2JLM5 398 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 CLDN3O15551 220 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 DFNA5O60443 496 aa3.29□□□□□ -1.88
SSB-209ENST00000470621 TNFSF13O75888 250 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms