RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PTP4A3O75365 173 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 IGHEP01854 428 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 CD63P08962 238 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 CCL3P10147 92 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 IFI30P13284 250 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 LIFP15018 202 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 ATP6V1B1P15313 513 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 CDH2P19022 906 aaPredicted RBP7.58□□□□□ -1.2
GTF3A-206ENST00000470606 TACR3P29371 465 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 CDK5Q00535 292 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 ALDH6A1Q02252 535 aaKnown RBP7.58□□□□□ -1.2
GTF3A-206ENST00000470606 LTBQ06643 244 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 COX10Q12887 443 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 CHAF1BQ13112 559 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 EFR3AQ14156 821 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 SLX4IPQ5VYV7 408 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 C12orf73Q69YU5 71 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 WBP2NLQ6ICG8 309 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 ZNF620Q6ZNG0 422 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 RASSF6Q6ZTQ3 369 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 TMPRSS11FQ6ZWK6 438 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 NUP54Q7Z3B4 507 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 VASH2Q86V25 355 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 ZNF440Q8IYI8 595 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 LINC00471Q8N535 108 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 WDSUB1Q8N9V3 476 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 OR13C2Q8NGS9 318 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 OR5W2Q8NH69 310 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 BRIX1Q8TDN6 353 aaKnown RBP7.58□□□□□ -1.2
GTF3A-206ENST00000470606 GNPDA2Q8TDQ7 276 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 TTC9Q92623 222 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 RELTQ969Z4 430 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 NACC2Q96BF6 587 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 BPIFA2Q96DR5 249 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 EVA1AQ9H8M9 152 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 AMBNQ9NP70 447 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 ANKRD10Q9NXR5 420 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 IL20Q9NYY1 176 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 MED11Q9P086 117 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 OSGIN1Q9UJX0 560 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 MYRFQ9Y2G1 1151 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 NCOR2Q9Y618 2525 aa7.58□□□□□ -1.2
GTF3A-206ENST00000470606 TRAV27A0A087WT01 109 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 A0A0G2JMM0 328 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 A0A1W2PPB8 328 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 A0A1W2PRS3 328 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 DCDC2BA2VCK2 349 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 A6NHS1 94 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 TRIM64CA6NLI5 447 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 KIR3DP1A8MWS1 328 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SHISA8B8ZZ34 492 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 EFNA2O43921 213 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 PRKYO43930 277 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 CDC40O60508 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SERPINA7P05543 415 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 IL11P20809 199 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 ITPKBP27987 946 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC1A3P43003 542 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 P2RX1P51575 399 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 PSPHP78330 225 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 MVKQ03426 396 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 CRYZQ08257 329 aaKnown RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 GINS1Q14691 196 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 QPRTQ15274 297 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 KCTD21Q4G0X4 260 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 GXYLT1Q4G148 440 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 CLEC12AQ5QGZ9 265 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 DCAF10Q5QP82 559 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 PRAMEF20Q5VT98 475 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 FOXB2Q5VYV0 432 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC30A6Q6NXT4 461 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC46A3Q7Z3Q1 461 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 RNF113BQ8IZP6 322 aaKnown RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC15A4Q8N697 577 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 TSPAN14Q8NG11 270 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC22A8Q8TCC7 542 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 DNAJA4Q8WW22 397 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SLC39A7Q92504 469 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 HDAC2Q92769 488 aaKnown RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 KTI12Q96EK9 354 aaPredicted RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 DNAJA3Q96EY1 480 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 MPP4Q96JB8 637 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 MOGAT1Q96PD6 335 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 IL4I1Q96RQ9 567 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 ING2Q9H160 280 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 FBXL2Q9UKC9 423 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 SIGLEC7Q9Y286 467 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 YARS2Q9Y2Z4 477 aaKnown RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 MED31Q9Y3C7 131 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 PIEZO2Q9H5I5 2752 aa7.57□□□□□ -1.2
GTF3A-206ENST00000470606 DSPP15924 2871 aaKnown RBP7.57□□□□□ -1.2
GTF3A-206ENST00000470606 ENO4A6NNW6 628 aa7.56□□□□□ -1.2
GTF3A-206ENST00000470606 G3V3Y1 287 aa7.56□□□□□ -1.2
GTF3A-206ENST00000470606 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
GTF3A-206ENST00000470606 F10P00742 488 aa7.56□□□□□ -1.2
GTF3A-206ENST00000470606 CCNA2P20248 432 aa7.56□□□□□ -1.2
GTF3A-206ENST00000470606 GSTM3P21266 225 aa7.56□□□□□ -1.2
GTF3A-206ENST00000470606 RBMS1P29558 406 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms